Roseovarius indicus: RIdsm_03934
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Entry
RIdsm_03934 CDS
T06222
Symbol
fadJ_3
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rid
Roseovarius indicus
Pathway
rid00071
Fatty acid degradation
rid00280
Valine, leucine and isoleucine degradation
rid00310
Lysine degradation
rid00362
Benzoate degradation
rid00380
Tryptophan metabolism
rid00410
beta-Alanine metabolism
rid00640
Propanoate metabolism
rid00650
Butanoate metabolism
rid00907
Pinene, camphor and geraniol degradation
rid00930
Caprolactam degradation
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
rid01212
Fatty acid metabolism
Module
rid_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RIdsm_03934 (fadJ_3)
00650 Butanoate metabolism
RIdsm_03934 (fadJ_3)
09103 Lipid metabolism
00071 Fatty acid degradation
RIdsm_03934 (fadJ_3)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIdsm_03934 (fadJ_3)
00310 Lysine degradation
RIdsm_03934 (fadJ_3)
00380 Tryptophan metabolism
RIdsm_03934 (fadJ_3)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RIdsm_03934 (fadJ_3)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RIdsm_03934 (fadJ_3)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RIdsm_03934 (fadJ_3)
00930 Caprolactam degradation
RIdsm_03934 (fadJ_3)
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RIdsm_03934 (fadJ_3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RIdsm_03934 (fadJ_3)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RIdsm_03934 (fadJ_3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
2-Hacid_dh_C
MotA_ExbB
DAO
F420_oxidored
Zeta_toxin
Asparaginase
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
QEW28109
UniProt:
A0A0T5P5C5
LinkDB
All DBs
Position
4026058..4028259
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AA seq
733 aa
AA seq
DB search
MTDFTMEKGADGVAVITWDTEGKSMNVMTMEAWPVLDGLIDDALADDAVKGIVITSGKDG
TFAGGMDLNVISKMKDMAGDEPAKGLFEGLMNMHGILRKIERAGMDDKNKGGKPIAAALP
GTALGIGLEIPLACHRIFAADNPKAKIGLPEIMVGIFPGAGGTTRLVRKLGAMAASPLLL
QGKLNDPKKAKSAGVVDEVVAPEELLDKAKEWVLSEPQIVKPWDEKGYKMPGGAPYHPAG
FMTFVGASAMVNKETQGAFPAAKALLSAVYEGALVPFDTALKIEARWFTNVLMNPSSSAM
IRSLFVNKEALEKGANRPDVPDQKVKKVGVLGAGMMGAGITLVSAMAGMQVVLIDQKQEA
ADKGKSYTADYMDKGIKRGKATEEKKTAALDLITATTDYAALDGCDLIIEAVFEDPKVKA
EVTKQALANVGEDCIFATNTSTLPITELAKASDTPDQFIGIHFFSPVEKMMLVEIIKGKE
TGPRAVAKALDYVRQIRKTPIAVNDARFFYCNRCIIPYINEGIRMVAEGVAPALIDNAAR
QLGFPVGPLQLVDETSIDLGAKIARATKAAMGDDYPDEAVDEVIFWMEGEGRLGRKSKAG
FYDYDEKGKRQGYWPGLAEKYPRAAEQPDLIEVQHRLMFAQVLEAVRALEEGVLEDIREG
DVGAILAWGFAPWSGGPFSWLDIIGAPYAAERCDQLTEKFGPRFTTPDLLRELAEKNQTF
YARFGTASEDEAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttcacgatggaaaaaggcgccgatggcgtcgccgtcatcacctgggacacc
gaaggcaagtccatgaacgtgatgaccatggaagcctggcccgtgctcgacgggctgatc
gacgacgcgctggccgatgacgcggtcaagggcatcgtcatcacctcgggcaaggacggc
acctttgccggcggcatggacctcaacgtcatctcgaaaatgaaggacatggcgggcgac
gagccggccaagggcctcttcgaggggctgatgaacatgcacgggatcctgcgcaagatc
gagcgcgcggggatggacgacaagaacaagggcggcaagcccatcgccgccgccctcccc
ggcacggcgctcggtatcggcctcgaaatcccgcttgcctgccaccgcatcttcgccgcc
gacaacccaaaggccaagatcggcctgccggagatcatggtcggcatcttccccggtgcg
ggcggcaccacgcggctggtgcggaagctgggcgcgatggcggcgagcccgctgttgttg
cagggcaagctgaacgaccccaagaaagccaaatccgccggcgtcgtcgacgaggtcgtg
gccccggaggaactgctcgacaaggccaaggaatgggtcctctccgagccgcagatcgtc
aagccgtgggacgagaagggctacaaaatgcccggcggcgccccctaccacccggcgggc
ttcatgaccttcgtcggcgcctcggccatggtgaacaaggaaacgcaaggcgccttcccc
gccgccaaggccctcctctccgccgtctatgaaggcgcgctcgtgcccttcgacaccgct
ctgaagatcgaggcgcgctggttcaccaatgtcctgatgaacccgtcctcctcggccatg
atccgctcgctcttcgtcaacaaggaagcgctggaaaaaggcgccaaccgccccgacgtg
ccggatcagaaggtcaagaaggtcggcgtgctcggcgccggcatgatgggcgcgggcatc
accctcgtctcggccatggccggcatgcaggtcgtgctgatcgaccagaaacaggaagcg
gccgacaagggcaaatcctacaccgccgactacatggacaagggcatcaagcgcggcaag
gcgaccgaagagaagaagaccgccgccctcgacctcatcaccgccaccaccgattacgcg
gcgctcgacggctgcgacctgatcatcgaggcggtgttcgaagatccgaaggtgaaggcc
gaggtcaccaagcaggcgctggccaacgtgggcgaggattgcatcttcgccactaacacc
tcgaccctgccgatcaccgagctggccaaggcgtcggacacccccgaccagttcatcggc
atccacttcttctcgcccgtcgaaaagatgatgctggtcgagatcatcaaggggaaagag
accggcccccgtgccgtggccaaggcgctcgactatgtccgccagatccgcaagaccccg
atcgcggtgaacgatgcgcgcttcttctactgcaaccgctgcatcatcccctacatcaac
gagggcatccgcatggtggccgagggcgtcgcccccgcgctcatcgacaacgcggcgcgc
cagctgggcttccccgtggggccgctgcaactcgtcgatgaaacctccatcgacctcggc
gccaagatcgcccgcgccaccaaggcggcgatgggcgacgactaccccgacgaggccgtc
gacgaggtcatcttctggatggaaggcgaagggcgcctgggccgcaaatccaaggcgggc
ttctacgactacgacgagaagggcaaacgccagggctactggcccggtctggccgagaaa
tacccccgcgccgccgaacagcccgacctcatcgaggtgcagcatcgcctgatgttcgcc
caggtgctcgaagcggtccgcgcgctggaggaaggcgtgctggaagacatccgcgaaggc
gatgtcggcgccatcctcgcctggggcttcgccccctggtcgggcggcccgttctcgtgg
ctcgacatcatcggggcgccttacgccgccgagcgttgcgaccagctgaccgagaaattc
ggcccccgcttcaccacccccgacctgctgcgcgagctggccgagaagaaccagaccttc
tacgcccgcttcggcaccgcgtcggaagacgaagccgcctga
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