Roseovarius indicus: RIdsm_03951
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Entry
RIdsm_03951 CDS
T06222
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rid
Roseovarius indicus
Pathway
rid00260
Glycine, serine and threonine metabolism
rid00460
Cyanoamino acid metabolism
rid00630
Glyoxylate and dicarboxylate metabolism
rid00670
One carbon pool by folate
rid00680
Methane metabolism
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
rid01230
Biosynthesis of amino acids
rid01240
Biosynthesis of cofactors
rid04981
Folate transport and metabolism
Module
rid_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIdsm_03951 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
RIdsm_03951 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIdsm_03951 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RIdsm_03951 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIdsm_03951 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIdsm_03951 (glyA1)
Enzymes [BR:
rid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RIdsm_03951 (glyA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QEW28126
UniProt:
A0A0T5P5D8
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All DBs
Position
4046516..4047823
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AA seq
435 aa
AA seq
DB search
MPHDGNQPFEGKDFFTQSLAERDPEIAKAIESELGRQRDEIELIASENIVSAAVMEAQGS
VLTNKYAEGYPGRRYYGGCQYVDIAENLAIERAKQLFNCGFANVQPNSGSQANQGVNQAL
LQPGDTILGMNLASGGHLTHGAAPNQSGKWFNAVQYGVRQQDNLIDYDQVEELAKEHKPK
MIIAGGSAIPRVIDFARFREIADMVGAYLHVDMAHFAGLVAAGEHPSPFPHAHIATTTTH
KTLRGPRGGMILTNDEDIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALQPEFKTYIKQ
VRANADALADQLIKGGLDIVTGGTDTHVMLVDLRPKKVTGNITDAALGRAHITTNKNGIP
FDPEKPTVTSGIRLGTPAGTTRGFKEDEFRQIADWIVEVVDGLAANGPDGNEAVEAKVKG
EVMAMCQRFPLYPNL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgacggaaaccagccctttgagggcaaagactttttcacccagtccctcgcc
gagcgcgaccccgagatcgccaaggccatagaatcggaactcggccgccagcgcgacgag
atcgagctgatcgcgtccgagaacatcgtttcggccgccgtgatggaggcgcagggctcg
gtcctgaccaacaaatacgccgaaggctacccgggccgccgctactatggcggttgccag
tatgtcgatatcgccgaaaacctagccatcgaacgggccaagcaactcttcaactgcggc
ttcgccaacgtgcagcccaactccggctcccaggccaaccagggcgtcaaccaggcgctg
ctgcagccgggcgacaccatcctgggcatgaacctcgcctcgggcggccacctcacccac
ggggcggcccccaaccagtcgggcaaatggttcaacgccgtgcaatacggcgtccgccag
caggacaatctgatcgactacgaccaggtcgaggaactggcgaaagagcacaagccgaag
atgatcatcgccggcggctcggccatcccgcgggtcatcgacttcgcccgcttccgcgag
atcgccgacatggtcggcgcctacctgcatgtcgacatggcccacttcgccggcctcgtc
gccgcaggcgagcacccctcgcccttcccgcatgcccacatcgccaccacgaccacgcac
aaaaccctgcgcggcccccgtggcggcatgatcctcaccaatgacgaggacatcgccaag
aaggtcaactcggccatcttccccggcatccagggcggcccgctgatgcacgtcatcgcc
gccaaggccgtggccttcggcgaggcgctccaacccgagttcaagacctacatcaagcag
gtccgcgccaatgccgacgcgctggccgaccagctgatcaagggcggtctggatatcgtc
accggcggcaccgacacccacgtcatgctcgtcgacctgcgccccaagaaagtcaccggc
aacatcaccgatgccgcgcttggccgggcccatatcaccaccaacaagaacggcatcccg
ttcgatccggaaaagcccaccgtgaccagcggcatccgcctcggcacccccgccggcacg
acccgcggcttcaaggaggacgagttccgtcagatcgccgactggatcgtcgaagtggtc
gacgggctggccgccaacggccctgacggcaacgaggccgtcgaggcgaaggtgaaaggc
gaagtcatggccatgtgccagcgcttcccgctctaccccaacctctga
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