KEGG   Roseovarius indicus: RIdsm_04011
Entry
RIdsm_04011       CDS       T06222                                 
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rid  Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:rid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rid03400]
    RIdsm_04011 (recQ_1)
Enzymes [BR:rid01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RIdsm_04011 (recQ_1)
    5.6.2.6  RNA 3'-5' helicase
     RIdsm_04011 (recQ_1)
DNA repair and recombination proteins [BR:rid03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RIdsm_04011 (recQ_1)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: QEW28185
UniProt: A0A0T5P5L7
LinkDB
Position
4100259..4102664
AA seq 801 aa
MTALPPLFTDWFAARGWHIHPHQQAMLDRADAPAQLLIAPTGGGKTLAGFLPTLTDLAEN
DHQGLHTLYISPLKALAADIKRNLTTPVDEMGLPIRIDDRTGDTPSSRKKRQRADPPHIL
LTTPESLALLTSYEDAARTFAGLKRVVIDEIHALAESKRGDQLMLALSRLQALCPGLRRV
GLSATVEDPAAIARLLACHPDPCDILQADPGPEPDIAMLETEERPPWSGGGAAYAIPAVL
DQIRRHRTTLIFHNTRAQAEIFFHNLWLANEESLPIGIHHGSLDRVQRERVEAAMQQGLL
RAIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHNYNAPSKALLVPANRFEV
VECQAALQAVRDRDLDGEPRGRGPQDVLCQHILIRACAGPFSADALYSEVTTAGAYADLT
RAEFDACLNFCATGGYALRAYDQWQRLKQTDGLWHLRDPRSARLIRMNIGTIQDSDLLKV
RMQRSRGGKPLGEVEEGFAASLTPGDTFLIGGEIVRYESLREMTVEVSRDRGRQPKVAVF
SGTKFATSTQLSQRILSLLNGGDWSALPAHTADWLRLQSDMSRLPKSGELLIESFPHEGR
EHACIYGFAGRNAQQTLGLILTKRMEELGLHPLGFVSTDYATLIWGLDPLTDPGPLFEMA
ALREGLDRWLAGNQLMKRTFRASATIAGLIQRNTPSAKKSGRQATFSSDILYDTLAKYDP
DHLLLQITRAEAMRGLIDFGRIEEMIARIDGRIDLLRLPRVTPFAAPLFLEQGRTPVEGA
AQERLLAEETEKLMAAAGLSA
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaccgccctgcccccgctcttcaccgactggttcgccgcccgcggctggcacatccac
ccgcaccagcaggccatgctcgaccgcgccgacgccccggcgcaactgctcatcgccccc
accggcggcggcaagacgctcgcgggcttcctgcccaccctcaccgacctcgccgaaaac
gaccaccaaggcctccacaccctctacatctcgcccctcaaggcgctcgccgccgacatc
aagcgcaacctcaccacgcccgtcgacgagatgggcctccccatccgcatcgacgaccgc
accggcgacacgccgtcatcgcgcaagaaacgccagcgcgccgacccgccccatatcctg
ctcaccacgccggaaagcctcgcgctcctcacctcctacgaggacgccgcccgcaccttc
gccggcctcaaacgcgtggtcatcgacgaaatccacgccctcgccgagtcgaaacgcggc
gaccagctcatgctcgccctctcccgcctccaggccctctgccccggcctccgccgcgtc
ggcctctccgccaccgtcgaagatcccgccgccatcgcccgcctcctcgcctgccacccc
gacccctgcgacatcctccaagccgaccccggccccgaaccggatatcgccatgctggaa
accgaggaacgccccccctggtccggcggcggcgccgcctacgccatccccgccgtgctc
gaccagatccgccgccaccgcaccacgctcatcttccacaacacccgcgcgcaggccgag
atcttcttccacaacctctggctcgccaacgaggaaagcctgcccatcggcatccaccac
ggctccctcgaccgggttcagcgcgagcgcgtcgaagccgccatgcaacagggtctcctc
cgcgccatcgtctgcaccggctcgctcgacctcggcatcgactggggcgatgtcgatctc
gtcatccaggtcggcgcgcccaagaacgtcaagcgcctcgtccagcgcatcggccgggcg
aaccacaattacaacgccccctccaaggccctcctcgtccccgccaaccgcttcgaggtg
gtcgaatgccaggccgccctgcaagccgtccgcgaccgcgacctcgacggcgaaccgcgc
ggccgcggcccccaggacgtgctgtgccagcacatcctgatccgcgcttgcgccggcccc
ttctccgccgacgcgctctactctgaagtcaccaccgccggcgcctatgccgacctcacc
cgcgccgaattcgacgcctgcctcaatttctgtgccaccggcggctatgccctgcgcgcc
tacgaccagtggcaacgcctcaagcagaccgacggcctctggcacctccgcgacccgcgc
agcgcccgcctcatccgcatgaatatcggcaccatccaggacagcgacctcctcaaggtc
cgcatgcagcgctcccgcggcggcaaacccctgggcgaggtcgaggaaggcttcgccgcc
tccctcacccccggcgacaccttcctcatcggcggcgagatcgtccgatacgaatccttg
cgcgaaatgaccgtcgaggtcagccgcgaccgcggccgccagcccaaggtcgccgtcttc
tccggcaccaagttcgccacctccacccagctcagccagcgcatcctgtcgctcctgaac
ggcggcgactggtcggcgctccccgcccacaccgccgactggctgcgcctgcaatccgac
atgtcgcgcctccccaaatccggcgagctgctgatcgaaagcttcccccacgagggccgc
gaacacgcctgcatctacggcttcgccggccgcaacgcccagcaaaccctcggcctcatc
ctcaccaagcggatggaggagctgggcctccacccgcttggcttcgtctccaccgattac
gccaccctcatctggggcctcgacccgctcaccgaccccggcccgctcttcgaaatggcg
gccctccgcgagggcctcgaccgctggctcgccggcaaccagctgatgaaacgcaccttc
cgcgcctcggccaccatcgccggcctcatccagcgcaacacgccctcagccaagaaatcc
gggcgccaggcgaccttttcgtcggacatcctctacgacacgctggccaagtacgacccc
gaccacctcctcctgcagatcacccgcgccgaggcgatgcgcggcctgatcgatttcggc
cgcatcgaggaaatgatcgcccgcatcgacggacgcatcgacctcctccgcctgccccgc
gtcacccccttcgccgcccccctcttcctcgaacagggccgcacccccgtcgaaggcgcg
gcacaggaacggctgctggccgaggaaaccgagaaactcatggccgccgccggcctctcc
gcgtga

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