Roseovarius indicus: RIdsm_04022
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Entry
RIdsm_04022 CDS
T06222
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rid03016
]
RIdsm_04022 (truA)
Enzymes [BR:
rid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RIdsm_04022 (truA)
Transfer RNA biogenesis [BR:
rid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RIdsm_04022 (truA)
Prokaryotic type
RIdsm_04022 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QEW28196
UniProt:
A0A0T5P5K3
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All DBs
Position
4115584..4116351
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AA seq
255 aa
AA seq
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MPRYALKVEYNGAPFAGWQRQADQPSVQGAIEAALARLEPGPHTIAAAGRTDAGVHGLGQ
VAHCDLTKDWEPFRLSEALNYHLKPQPVAILACARVADDWHARFSATERRYLFRLLMRRA
PATHDKGLVWHVRNPLDLDAMREGAAHLIGHHDFTTFRSTICQAKSPVKTLDEITITATK
GLSGPEFHFRLRARSFLHNQVRSIVGTLERVGSGAWAPSDVATALAARDRAACGPVCPPH
GLYLAAVRYPDDPFA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctacgcgctcaaggtcgaatataacggcgccccctttgccggctggcaaagg
caggccgatcaaccctcggtgcaaggcgcgatcgaggcggcgctggcacgcctcgaaccc
ggcccgcacaccatcgccgcggccggccgcaccgatgccggcgtccacggtctcggccag
gtcgcccactgcgacctgacgaaagactgggagccgttccgcctctccgaggccctgaac
taccacctcaaaccccagcccgtcgccatcctcgcctgcgcccgcgtcgccgacgactgg
cacgcccgcttctcggccaccgagcgccgctacctcttccgcctcctcatgcgccgtgcc
cccgccacccatgacaagggtctggtctggcatgtccgcaatccgctcgacctagacgcc
atgcgcgaaggcgcggcacatctcatcggccaccacgacttcaccaccttccgctcgacc
atctgccaggccaagagccccgtcaaaaccctcgacgaaatcaccatcaccgccaccaaa
ggcctctccggccccgaattccacttccgcctccgcgcccgctccttcctgcacaaccag
gtccgctccatcgtcggcaccctggaacgcgtgggcagcggcgcctgggccccctccgac
gtcgccaccgcactggccgcccgcgaccgcgccgcttgcgggccggtctgcccgccccac
ggcctctacctggctgccgtccgctacccggatgaccccttcgcgtga
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