Roseovarius indicus: RIdsm_04068
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Entry
RIdsm_04068 CDS
T06222
Symbol
cdhR_7
Name
(GenBank) Carnitine catabolism transcriptional activator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_04068 (cdhR_7)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RIdsm_04068 (cdhR_7)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
HTH_20
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QEW28241
UniProt:
A0A0T5P683
LinkDB
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Position
complement(4161226..4162167)
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AA seq
313 aa
AA seq
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MPEWTKSPARPVRIAFLLFDEFSNLCLANCIEPLRAANTLTHANAFDWRIVTMDGRTGRS
SSGLDILASAALSQVGAVDYLFVLASYAHESHDTSANRRMLRAAARRAEVTVGLDSGPWL
LASAGLLSGRRATVHWDLLDAFTERFLDVEASQARVLKDGPFMTCAGAMSALDLTLDLIA
EHLGLSARLDVEALFLHGDPPVGKADEAVADPMVRRALAVMRETVERPLPLKQLAKRLSC
QPRTLDRHFRARLGAPPGTVYRHLRLSAARKLIEDSRQSISEIALRCGYDSPAAMTRAIR
QVYGATPSALRRK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatggacaaaatcgccggcgcgcccggtgcgcatcgcctttctgctgttcgac
gagttctcgaacctgtgccttgccaattgcatcgaaccgttgcgggcggcgaacacgctg
acccatgcgaacgcgttcgactggcgtatcgtgacgatggacgggcggacggggcgctcg
tcgagcggactcgacattctggccagtgccgcgctgagccaggtgggggcggtggattac
cttttcgtgctggccagttacgcacatgaaagccacgacacgtcggccaaccggcggatg
ttgcgggcggcggcaaggcgggcggaggtgacggtggggcttgattcggggccgtggctt
ctggcgtcggcggggttgttgagcgggcggcgggcgacggtgcactgggatctgctggat
gccttcaccgagcggttcctagatgtggaggcaagccaggcgcgggtgctgaaggacggg
cccttcatgacctgcgccggggcaatgtcggcgctggacctgacgcttgacctgattgcc
gagcatctggggctgtcggcccggctggatgtggaggcgctgttcctgcatggcgacccg
ccggtgggcaaggcggacgaggcggtggccgacccgatggtgcggcgggcgctggcggtg
atgcgcgagacggtcgaacggccgttgccgctgaagcaactggcgaagcggctgtcgtgc
cagccgcggacgctggaccgccacttccgcgcgcggctgggggcaccgcccgggacggtc
tatcggcatcttcgtctgtcggccgcgcgcaagctgatcgaggacagccggcagtcgatt
tccgagatcgcgctgcggtgcggatatgacagcccggccgcgatgacccgggcgataagg
caggtctatggcgcgaccccctcggcgctgcgtaggaaatga
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