Roseovarius indicus: RIdsm_04279
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Entry
RIdsm_04279 CDS
T06222
Symbol
livF_13
Name
(GenBank) LIV-I protein F
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_04279 (livF_13)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_04279 (livF_13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_04279 (livF_13)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_04279 (livF_13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_16
SbcC_Walker_B
AAA_23
MukB
AAA_19
RsgA_GTPase
AAA_15
SRP54
Motif
Other DBs
NCBI-ProteinID:
QEW28448
UniProt:
A0A0T5P5N0
LinkDB
All DBs
Position
complement(4374619..4375305)
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AA seq
228 aa
AA seq
DB search
MLQFRDVCASYEDSQILFDLSFEVEEGSVTTLLGKNGMGKTTTIRTLFGLTDRIGGDIYL
EGDRINGVPTHEIAKRGVALVPEGRQVFPTLTVMENLLATARNGCDGLEEVFDLFPRLAE
RKGSFGNLLSGGEQQMLAIGRALLTQPRFLILDEATEGLAPAVRREIWGALKRLKDRNLT
ILVIDKSLKPLCKLGDRHHVIRKGEIAWTGPSEVLADADSEARRHLSL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattccgcgatgtctgcgccagttacgaggacagccagatcctgttcgacctc
agtttcgaggtggaggaggggtcggtgacgacgttgctgggcaagaacgggatgggcaag
acgacgaccatccgcacgctctttggcctgaccgaccggatcggcggggatatctacctg
gaaggcgaccggatcaacggggtgccgacgcatgagatcgccaaaaggggcgtggcgctg
gtgcccgaggggcggcaggtgttcccgacgctgacggtgatggagaacctgctggcgacc
gcgcggaacgggtgcgacgggctggaggaagtgtttgatttgtttcccagattggcggag
cggaagggctcgttcgggaacctgttgtcggggggtgaacagcagatgctggcgatcggc
cgggcgctgctgacgcagccgcggttcctgatcctcgacgaggcgacggaggggctggcg
cccgccgtgcggcgcgagatctggggggccctgaagcggctgaaggaccggaacctgacg
atcctggtgatcgacaagagcctgaagccgctgtgcaagctgggggaccggcatcacgtg
atccgcaagggcgagatcgcctggaccgggccgtcggaggttctggcggatgcagactcc
gaggcgcggcggcatctgagtttgtga
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