Roseovarius indicus: RIdsm_04292
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Entry
RIdsm_04292 CDS
T06222
Symbol
iclR_4
Name
(GenBank) Acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_04292 (iclR_4)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RIdsm_04292 (iclR_4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_11
MarR
TrmB
HTH_20
HTH_Crp_2
Fe_dep_repress
HTH_5
HTH_38
MarR_2
HTH_32
HTH_29
HTH_7
Dimerisation
GntR
FUR
Motif
Other DBs
NCBI-ProteinID:
QEW28461
UniProt:
A0A0T5P5N7
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Position
4389561..4390394
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AA seq
277 aa
AA seq
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MPSDTAPDPQNRRARGRPRGWDDKTEQNTIKSLDRAMLVFEHLSRSQGKMLTELADDLNQ
SPATVYRVLVTLETRGLVEFDPAEQLWHIGPQAFVIGAGFLRRTSLVERARPILRRLMEV
TGETANLGRELDGQVLFLSQVETNATIRAFFPPGTLAEMHSSGIGKVLLAQMSEERIARI
LADHPMQAFTPNTITDPATLSRELATIRAQGFAIDAEERNEGMRCIAAPVFDHSQSAVAG
LSVSGPTSRVSEEKTDEFSHAVIQAARDLSAALGGLP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgacaccgctcccgacccccagaaccgccgcgcccgcggccggccgcgcgga
tgggacgacaagaccgaacagaacaccatcaagtcgctcgaccgggcgatgctcgtcttc
gaacatctcagccgctcacagggcaagatgctcaccgaactggccgacgacctgaaccaa
tcccccgccacggtctaccgcgtgctcgtcacgctcgagacccgcggcctcgtcgaattc
gaccccgccgaacagctctggcatatcggcccgcaggccttcgtcatcggcgccggcttc
ctccgccgcaccagcctcgtcgaacgcgcccgcccgatcctgcgtcggttgatggaggta
acaggcgaaaccgccaatctcggccgcgagctggacggacaggtgctcttcctcagccag
gtcgaaaccaacgccaccatccgggccttcttcccgcccggcacactcgccgaaatgcat
tcctcgggcatcggcaaagtgcttctggcccagatgtccgaggaacgaattgcgcgcatc
ctggccgaccacccgatgcaggccttcacccccaacaccatcaccgacccggcaacgctc
tcccgtgaactggccaccatccgggcacagggcttcgccatcgacgccgaggaacgcaac
gagggcatgcgctgtatcgcggccccggtcttcgaccacagccaaagcgcggtggccggc
ctgtccgtctcgggcccgacaagccgggtgtcggaagaaaagacggacgagttcagccat
gccgtcatccaggccgcccgcgatctttccgcggccctcggcggccttccgtga
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