Roseovarius indicus: RIdsm_04305
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Entry
RIdsm_04305 CDS
T06222
Symbol
hcpC
Name
(GenBank) Putative beta-lactamase HcpC precursor
KO
K07126
uncharacterized protein
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
RIdsm_04305 (hcpC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_17
PG_binding_1
TPR_16
TPR_1
TPR_2
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_8
TPR_9
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-ProteinID:
QEW28474
UniProt:
A0A0T5P5I9
LinkDB
All DBs
Position
complement(4408080..4411622)
Genome browser
AA seq
1180 aa
AA seq
DB search
MNWYVAHIAGAIFLYSICAPFHLEAQERPCLDGSGAEGVAACDARLADPSNLTPSEVAAY
RRARAGHRLDVSDHAGALADLDALSQFDAASTLHHYRRALALKALDRPEDAMEAVGRALD
LDPQHVDSLLLRAELAVAGGEAETALADAGLAITLQPDNAAANTLMADALRQIGATDAAD
RSREQAETVARDDSGSEAGDVGLSDVAEDKATEPDKPAEPASAALSAGDEARPAATAQAT
NDLELVFWNDVKNSTSPEELEAFVAAFPESVFVTLATLRIERLKGQTSVAVAKPPEAQPV
VTPPPELPPTRALRFQLRKDDGSGAAVWKAMELPTGGFVFAGITTDEAENRDLAWVARYD
ADGKRLWQVSEPSDHEFTGFTDLVLLGSGNLMLSEVKTDNGDEPPLMRARVFDMDGNPVS
DHEIEAGTQGWPYAGLAPLEDGGAALVSETRESEKVSATFLMRFDAEGAPVWRHELEAEF
SMAAIRVVGSGGHIFVLGRMWDPERDKDLFKESTVWLRKYTLDGEMVWHRDLNTGQDLYP
GDLEALPDGDVLAIYTRDEKNYAVRVDADGTKAPRVSAGIGQKQYAYNLEVFEDGGYAVA
GSAGIKDDYDNSVAWITWYDAAGKEVSRRVFGDKQEEHVSALGSTHDGGLLVVGQDRAWS
EAMQPSWVEVVPRLRRINAALLKPESSGVMQKCVRRAAGDGDTQNPYDAKGAAWEDFDAE
AAKAACTLAAGLYPENAAVQFHYGRTMHKLEAFGEAAKAYAVASDLGYVRANLGLAVIHS
EGPLHLRDEIKAVRFLQRGFAAGDAEAAFLLGERYQAGKGVLKSDKKAAEAFRVAADGGM
AEAQFRLAMALRNGKGVTYDTKAARTYFTKASDQGHVEAKVELARMYLYGIGGSANRFVA
RKLYIDAAEAGHAYAAERLAQAYRWGDDLAGVNQSKAAEYYHKAVDNGSSRALADLGYFY
MYGVAVPENKAKAISYYRRGVAKGDGLAEYYLGSAYRYGKGLPKNEAEAMRLFNLAVADG
QAEAMVELGYMYRSGIGTAKDEKKAFTYFNRAANRKSRRGLRESGWMLCFGEGTTKSLKV
GLDRLKEVAKKEDGLTEVYLGYIYETVASVRDPNAAARHYYKGLRLGEPWPVSRNAQAWN
AATARELQQRLKNGGHYDGPIDGAIGPASVKAMKALCRCG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatgttgcgcatattgctggcgccatattcctgtattccatctgcgcaccg
tttcatttggaggcgcaggagaggccctgtctcgacggcagcggtgccgagggggtggcg
gcctgtgatgctcggttggccgacccctccaacctgaccccgtcggaggttgctgcctat
cgccgggcccgggcggggcacaggctggatgtgtcggatcacgcgggggctctcgccgat
ctggatgcgttgagccagttcgatgccgcgtcgacgttgcaccattaccgcagggcgctg
gcgctgaaggcgcttgatcgaccggaagacgccatggaggcggtcggccgggcgctcgat
ctcgatccgcagcacgtggacagccttcttttgcgggcagagcttgcggttgcggggggt
gaggcggaaaccgcgctggccgatgcggggctggccatcacgctgcaaccggacaatgcc
gcggcgaataccctcatggcggatgccctgcgccagatcggcgccactgacgccgccgat
cgcagccgggagcaggcggagaccgtcgcgcgggacgatagcgggagcgaggcgggtgat
gtggggttgtcggatgtggccgaggacaaggcgaccgagcccgacaagccggcggagcct
gcctctgccgcgctatctgcgggtgacgaggcccggccggctgccaccgcacaggcgacg
aacgacctggaactggtgttctggaacgacgtgaagaacagcacgtcgcccgaggagttg
gaggcctttgtcgcggcgttccctgagtcggtgttcgtcacgctggccacgttgcggatc
gagcggctgaaaggtcagacctcggtggcggttgccaagccgcccgaggcgcagccggtg
gtgacgccgccgcccgagcttccgccgacccgcgccctgcggttccagctccgcaaggac
gacggcagcggggccgcggtatggaaggcgatggagttgccgacgggcgggttcgtcttt
gccgggattacgaccgatgaggccgaaaacagggatctggcatgggtcgcccggtatgat
gcggatggcaagcgtctgtggcaggtgtcggagccatccgaccacgagttcaccggcttt
accgatcttgtcctgttggggagcggcaaccttatgctgtccgaggtgaagaccgacaac
ggagacgagccgccgctcatgcgggcgcgcgttttcgacatggacggcaaccctgtatcg
gaccacgagatcgaggccggcacgcagggctggccctatgccggcctggccccgctggag
gatggcggcgccgcgctggtcagcgagacccgcgagagcgagaaggtgagtgccaccttc
ctgatgcggttcgatgccgagggcgcgccggtttggcggcatgaactcgaggccgagttt
tccatggcggcgatccgggtcgtggggtcgggcgggcatattttcgtgctggggcgcatg
tgggaccccgaaagggacaaggatcttttcaaggagtcgacggtctggcttcggaaatac
acgctggatggcgagatggtctggcaccgcgatctcaataccggtcaagacctttatccc
ggcgatctcgaggccctgccggatggcgacgtgctggccatctacacgcgcgacgagaag
aattatgccgtccgggtcgatgccgatggcaccaaggcgccaagggtttcggccggtatc
gggcagaagcagtacgcctacaacctcgaggtgttcgaggatggcggatatgccgtggcg
ggctcggccgggatcaaggacgactacgacaattcggtggcctggatcacctggtacgac
gcggccggcaaggaagtgagccgccgggtgttcggcgacaagcaggaggagcatgtctcg
gctctcgggtcgacgcatgacggcggtttgcttgtcgtcggccaggacagggcatggtcc
gaggcgatgcagccctcgtgggtcgaggtggtgccgcgcctgcgccggatcaacgcggcc
ctgctcaaaccggaaagcagcggggtgatgcagaaatgcgtgcgccgcgcggccggtgat
ggggatacccagaacccgtatgatgcgaagggggctgcctgggaggattttgatgccgag
gccgcaaaggcagcctgtacgctggccgccggcctctaccccgaaaacgcggcggttcag
ttccactatggccggacgatgcacaagctcgaggcgttcggtgaagcggccaaggcctat
gcggtggcgtccgaccttggctatgtgcgcgcgaaccttggtcttgccgtgatccattcg
gaaggtccgttgcacctgcgcgacgagatcaaggcggtgcggttcctgcagaggggcttt
gcggccggagatgccgaggccgcctttctgcttggagaacggtaccaggccggcaaggga
gttctgaagagtgacaagaaggcggccgaggcctttcgcgtggccgccgatggcggcatg
gccgaggcgcaattccggctggccatggccctgcgcaatggcaagggggtcacctacgac
accaaggcggcgcggacctatttcaccaaggcaagcgatcaggggcatgtcgaggccaag
gtcgaactggcgcgcatgtacctgtacgggatcggcggttcggcaaaccgtttcgtcgcc
cggaagctttacatcgatgccgccgaggcggggcatgcctatgcggccgaacggcttgcc
caggcctatcgctggggcgacgatcttgcgggggtgaaccagtcgaaggcggccgagtat
taccacaaggcggtcgataacggcagttcccgggcgctggcggacctgggctatttctac
atgtacggcgtggcggtgccggagaacaaggccaaggcgatcagctattaccgccggggc
gtggccaagggggacgggctggcggagtactatctcgggtcggcctatcgctatggcaag
gggcttcccaagaacgaggccgaggcgatgcgcctgttcaacctggccgtggcggacggc
caggccgaggcgatggtcgaactcgggtacatgtaccgttcagggatcggcaccgccaag
gatgaaaagaaggcctttacctatttcaaccgcgccgcgaaccggaaaagccgcaggggg
cttcgggaatccggctggatgctgtgtttcggtgagggcaccacgaaaagcctgaaggtc
gggctcgatcgcctgaaggaggtggcgaagaaagaggatggcctcacggaagtttacctg
ggctatatctacgaaaccgtcgcctcggtgcgcgaccctaacgctgcggcgcgacattac
tacaagggattgcggctgggcgagccgtggcccgtgtcccgcaacgcgcaggcctggaac
gccgcgacggcgcgggagttgcagcagcggctcaagaatggtggccattacgacgggccg
atcgacggggccatcgggccggcgtccgtcaaggcgatgaaggcgctgtgccggtgcgga
tag
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