Roseovarius indicus: RIdsm_04433
Help
Entry
RIdsm_04433 CDS
T06222
Symbol
cmpR_2
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_04433 (cmpR_2)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIdsm_04433 (cmpR_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QEW28601
UniProt:
A0A5P3AH94
LinkDB
All DBs
Position
4577100..4578083
Genome browser
AA seq
327 aa
AA seq
DB search
MVAQPQESTPAMPKDGSRITLRQLEIFLAAVENRSFAAAADRLSLSAPAVSMQMSKLGEE
LGAVLFEKDGRSIQPTDIAHALVPYAREMTTTLSEAVETVKSMQGELDNRLRVAMVSTAR
NFGPQLLQEFQKTHPGIDLQITIANRRGVIDALESGQADIALMGRPPRRIEVTAHQFARH
PYVLISHPDHPLARFRHIRRADLTAHRFLVREAGSGTRMVHEHYFLSEGLALPQAQEMDS
NANIKQAVMANMGLAFISAHTIALEHEAGKLTILDAEGMPEWRDWFVLYPKDAKLGAAGR
QFRDHIRAKGPAFMQDFFGDALALDQS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcaaccgcaagagagcacgcccgccatgccgaaagacggctccaggatcacc
ctgcgccagctcgagatctttcttgctgccgtcgagaaccgcagcttcgccgccgcggcc
gacaggctgtcgctgtccgcccccgccgtctccatgcagatgagcaagctgggcgaggaa
ctcggcgccgtcctcttcgaaaaagacggccgctcgatccagcccaccgatatcgcccac
gccctcgtgccttacgcccgcgaaatgacaacgaccctgtccgaagcggtcgaaacggtg
aaatccatgcaaggcgagctcgacaaccgcctgcgcgttgccatggtatcgaccgcccgc
aacttcggcccgcaactgctgcaggagttccagaaaacccatcccgggatcgacctgcag
atcaccatcgccaaccgccgcggggtgatcgacgccctcgaaagcggccaggccgacatc
gccctcatgggccgcccgccccgccgcatcgaagtgacggcgcatcagttcgcccgccat
ccctacgtgcttatcagccacccggaccacccgctcgcccgtttccggcacatccgccgc
gccgacctcacggcccaccgcttcctcgtgcgcgaagccggctccggcacccgaatggtg
catgaacactacttcctcagcgaaggcctcgccctgccacaggcccaggaaatggacagc
aacgccaatatcaagcaggcggtgatggccaacatgggccttgccttcatctcggcgcac
accatcgcgctcgagcacgaagccggcaagctcaccatcctggacgccgaaggcatgccg
gaatggcgcgactggttcgtgctctatccgaaagacgccaagctgggcgccgccggccga
cagttccgcgaccacatcagggccaagggcccggccttcatgcaagacttcttcggcgac
gctctcgcgctggatcagtcgtaa
DBGET
integrated database retrieval system
