Roseovarius indicus: RIdsm_04457
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Entry
RIdsm_04457 CDS
T06222
Symbol
tamB
Name
(GenBank) Autotransporter assembly factor TamB
KO
K09800
translocation and assembly module TamB
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_04457 (tamB)
Transporters [BR:
rid02000
]
Other transporters
Pores ion channels [TC:
1
]
RIdsm_04457 (tamB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
QEW28625
UniProt:
A0A0T5P2V8
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All DBs
Position
4600931..4605262
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AA seq
1443 aa
AA seq
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MRLLRLIALVTLTALPAAAQEENEADKTYLEGWIEEALSGAGRSVTITGFRGALSSNATL
DRMTISDEDGVWLTMEDATLVWSRAALLRGEVDVTELSAAVIDIARLPEGGEDVTPEDSE
AKAFALPELPVSVSIDELKAEEVRLGAPILGEAATMSVEATIQLADGAGTAQLAIERTDR
PDQITLDAAFDNESRVLAIDLDFDEGEGGMVSNLLNVPGEPAMRLQVQGEAPLSDFEAQI
ALSSDGTRRFGGALQIGALDADNEEAGYAFSTDLSGDLRQLFTPDLHPFFGENASLRVSG
QTYADGSLNLDTLSLDAGGMELTGNLALDPEGWPREFNLDGRVAGEGRLRLPISEPATSI
SSGRIVARYNASEGDAWRADISVDGLERDGLTVGSATIDGTGTITRGDAQSLTADLDFTA
EDVDHENENLARAIGAAPGGTLRLTYRPDTPVQVETLEVASGDATLTANGELDGLSDGFP
VSGTATLQADDLRRFAGVAGRDLAGSANLKVEGEGTLLGGAFDIDLSAATQDLETGTERL
DPLLRGRSTLDIAARRTEEGTFIDRLVIDNPSVDAEAEARLSAESGALTLKGAVQDIALV
DSRVSGPATIDTAMGWQADGQVTVSRLLLEAVDATLTAEGSANIENDTLPFDGRLTLQAA
DLSRLADLADRPLDGAVDLSVTGTGTIRKSGGDTQADPEARGVEAIIAQVEALLGDRFEI
DLTATSQDLETGIDRLDPILRGEARVEIETSRTEDGTAVDRLYIDSDALTAEADAQLQPE
TASLALKARLDNLGRVEPTLSGPANIDTGLTWQADDGQVTISRLSLDALDARLSTEGTIG
TGNPDLPVNGQLSLDAQDLSRLAGLVGQPLTGTIDLDVAGSGKIRGRSADAEISLDATGF
RSGIAEIDRILGSDITLDTKLAYGDSTPFVETLELTAARLSASASSAAPGEPVTISARLA
DLGLLAPGINGPATLDGRVTILDSRGEDLDVNLDFNGPGGVGARIAGRINDLGQTVSLSI
NGNAPLALANSFIQPRSIEGPARFDLRVEGRPSLQALSGQASINNARVSLPGLATAIEGL
TGTVNLSGGRATADITGNTGTGGNFRVTGPVTLSAPFNAQLETRLNGLRVIDPSLFETTV
DGRITLNGPLTGGARIGGAVMLGRTEIQVPSGGSSAPGTIPDLRHVNEPAAVNRTRRRAG
MVETGGRSGPAAAFPLDLVINAPNQVFVRGRGLDAELGGAIRLGGTTANVNASGTFELIR
GRMDILTKRLDLTEGLIDLRGALDPYVRFVARTESDDMTIDIILEGLASNPSVSFTSSPD
LPQEEILAQLLFGRSFTSMSAFQAAQLVSAVATLSGRGSGGLTGRLRGALGLSDFDVTTT
DSGATQFSAGTYISENIYSEFTADSDGNNEVNLNLDLSSSVTVKGSASSTGDTGLGIFYE
KDY
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcctccgcctcatcgcgctcgtcaccctcaccgccctgcccgccgcggcacag
gaagaaaacgaagccgacaagacctacctcgaaggctggatcgaagaggcgctctcgggc
gccggccgctcggtcaccatcaccggcttccgcggcgcgctctcgtcgaacgccacgctc
gaccggatgaccatctccgacgaagacggcgtctggctgaccatggaagacgccacgctc
gtctggtcccgcgccgcgctcctgcgcggcgaggtcgacgtcactgaactctccgccgcc
gtcatcgacatcgcccgcctccccgaaggcggcgaggacgtcacgcccgaggattccgag
gccaaggccttcgccctccccgaactgcccgtctccgtctccatcgacgagctcaaggcc
gaagaggtccgcctcggcgccccgatcctgggcgaggccgccaccatgtcggtcgaggcc
accatccagctcgccgatggcgccggcaccgcccagctcgccatcgaacgcaccgaccgg
cccgaccagatcaccctcgacgccgccttcgacaacgaaagccgcgtcctcgccatcgat
ctcgacttcgacgagggcgaaggcggcatggtctccaacctcctcaacgtccccggcgaa
cccgccatgcgcctccaggtgcagggcgaggcgccgctctccgatttcgaagcccagatc
gccctttcctccgacggtacccgccggttcggcggcgcgctgcagatcggcgccctcgac
gccgacaacgaagaagccggctatgccttctccaccgatctctccggcgacctccgccag
ctcttcacccccgacctgcacccgttcttcggtgaaaacgcctcgctgcgcgtctccggc
cagacctatgccgatggcagcctgaacctcgacacgctctcgctcgacgccggcggcatg
gaactcaccggcaacctcgccctcgaccccgagggctggccgcgcgaattcaacctcgac
ggccgcgtcgccggcgaaggccgcctgcgcctgccgatctccgaaccggccacctccatc
tcgtcgggccggatcgtcgcccgctacaacgcctccgaaggcgatgcctggcgcgccgac
atctcggtcgacgggctcgaacgcgacgggctcaccgtcggcagcgccacgatcgacggc
accggcaccatcacccgcggcgacgcgcaaagcctcaccgccgatctcgacttcacagcc
gaagacgtcgaccacgagaacgaaaaccttgcccgcgccatcggcgccgcccccgggggc
acgctgcgcctcacctaccgccccgacacgccggtgcaggtcgaaaccctcgaggttgcc
agcggcgacgccaccctcaccgccaacggcgaactcgacggcctgtccgacggcttcccc
gtctccggcaccgccaccctgcaagccgacgacctccgccgcttcgccggcgtggccggg
cgcgaccttgccggctccgccaacctcaaggtggaaggcgagggcaccctcctcggcggc
gccttcgacatcgacctctccgccgccacgcaagatctcgaaaccggcaccgagcggctc
gacccgctcctgcgcggccgctccaccctcgacatcgccgcccgccgcaccgaagagggt
accttcatcgaccgcctcgtcatcgacaacccctccgtcgatgccgaagccgaggcccgc
ctcagcgccgaaagcggcgcgctcaccctcaagggcgcggtacaggacatcgctctcgtc
gactcccgcgtctccggccccgccaccatcgacaccgccatgggctggcaggccgacggg
caggtcaccgtctcccgcctcctcctcgaagcagtcgacgccaccctcaccgccgagggc
agcgcgaatatcgagaacgacaccctccccttcgacggccgcctcaccctgcaggccgcc
gacctctcccgcctcgccgacctcgccgaccgccccctcgacggcgccgtcgacctcagc
gtcaccggcaccggcaccatccgcaaatctggcggcgacacccaggccgaccccgaggcc
cgaggcgtcgaagccatcatcgcccaggttgaagccctcctcggcgaccgcttcgaaatc
gacctcaccgccacctcgcaagacctcgaaaccggcatcgaccggctcgaccccatcctg
cgcggcgaggcccgcgtcgaaatcgaaaccagccgcaccgaagacggcaccgccgtcgac
cgcctgtacatcgacagcgacgcgctcaccgccgaggccgacgcgcaactccagcccgaa
accgcctccctcgccctcaaggcccggctcgacaatcttggccgcgtcgagcccaccctc
tcgggccccgccaacatcgacacggggctgacatggcaggccgatgacggccaggtcacc
atctcccgcctctccctcgacgcgctcgacgcccgcctctcgaccgagggcaccatcggc
accggcaaccccgacctccccgtcaacggccagctctcgctcgacgcgcaggacctctcc
cgcctcgccggcctcgtgggccagcccctcaccggcaccatcgacctcgacgtcgccggc
tccggcaagatccgcggccgcagcgccgacgccgaaatctcgctcgacgccacgggcttc
cgctccggcatcgccgagatcgaccgcatcctcggctccgacatcaccctcgacacgaag
ctcgcctacggcgacagcacccccttcgtcgaaaccctcgaactcaccgccgcccgcctc
tcggcctccgcctccagcgcggccccgggcgagcccgtcaccatctccgcccgcctcgcc
gacctcggcctgctggcgcccggcatcaacggcccggccacgctcgacggccgcgtgacc
atcctcgacagccgcggcgaagacctcgacgtcaacctcgacttcaacgggcccggcggc
gtcggcgcccggatcgccggccggatcaacgacctcggccagaccgtctcgctgtcgatc
aacggcaacgcccccctggcactcgccaacagcttcatccagccccgctcgatcgaaggc
ccagcccgcttcgacctccgcgtcgagggccggcccagcctccaggccctctccggccag
gcctccatcaacaacgcccgcgtctccctccccgggctcgccacggccatcgaagggctc
accggcaccgtcaacctctccggcggccgcgccacggctgacatcaccggcaacaccggc
accggcggcaatttccgcgtcaccgggcccgtcaccctctccgcccccttcaacgcccag
ctcgaaacccgcctcaacggcctccgcgtcatcgacccctcgctgttcgaaaccaccgtc
gacggccgcatcaccctcaacgggccgctcaccggcggggcgcgcatcggcggcgcggtc
atgctcggccgcaccgagatccaggtcccctccggcggcagctccgcccccggcaccatc
cccgacctgcgtcacgtcaacgaacccgccgcggtcaaccgcacccgccgccgcgccggc
atggtcgaaaccggcggccgcagcggccctgccgccgccttccccctcgacctcgtgatc
aacgcaccgaaccaggtcttcgtccgcggccgcggcctcgacgccgaactgggcggcgcc
atccgcctcggcggcaccaccgccaacgtcaacgccagcggcacgttcgagctgatccgc
ggccggatggacatcctcaccaagcgcctcgacctcaccgagggcctgatcgacctgcgc
ggcgcgctcgacccctacgtgcgcttcgtcgcccgtaccgaatccgacgacatgaccatc
gacatcatcctcgaaggtctcgcctccaacccctcggtcagcttcacctcctcccccgac
ctcccgcaggaggaaatcctcgcccagctcctcttcgggcgcagcttcacctccatgtcg
gccttccaggcggcccagctggtgagcgcggtcgccaccctctcggggcgcggctcgggc
gggctgacggggcgcctgcgcggcgcgctcgggctcagcgatttcgacgtcaccaccacc
gactccggcgccacccagttcagcgcgggcacctatatctccgagaacatctactccgag
ttcaccgccgacagcgacggcaacaacgaggtcaacctcaacctcgacctctcctcctcg
gtcacggtcaagggcagcgccagcagcaccggcgacaccggcctcgggatcttctacgag
aaggattactga
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