Roseovarius indicus: RIdsm_04515
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Entry
RIdsm_04515 CDS
T06222
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rid03110
]
RIdsm_04515 (clpB)
Chaperones and folding catalysts [BR:
rid03110
]
Heat shock proteins
HSP100
RIdsm_04515 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
RuvB_N
TniB
Mg_chelatase
AAA_7
IstB_IS21
AAA_18
bpMoxR
AAA_3
AAA_25
NACHT
MTR4-like_stalk
T2SSE
Torsin
NYD-SP28
Motif
Other DBs
NCBI-ProteinID:
QEW28677
UniProt:
A0A0T5P2N8
LinkDB
All DBs
Position
complement(4671066..4673684)
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AA seq
872 aa
AA seq
DB search
MDLSKFTERSRGFLQAAQTIAMRESHQKLAPEHVLKALMDDDQGLASNLIKRAGGNPQRV
VQALELSLGKIPKVSGDAGQVYMDNQTGKVLDEAEKLAKKAGDSFVPVERLLTAMAVVKS
PAKDALEQGGVSAQSLNEAVNDIRKGRTADSASAEDTYEALEKYARDLTKAAEDGKIDPI
IGRDDEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLQNKRLLSL
DMGALIAGAKYRGEFEERLKAVLNEITNAAGEIILFIDEMHTLVGAGKTDGAMDAANLIK
PALARGELHCIGATTLDEYRKHVEKDAALARRFQPLMVSEPTVEDTISILRGIKEKYELH
HGVRISDSALVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRDIL
QKQIEAEALRKEDDAASKDRLEKLEKELAELQEKSAEMTAQWQAERDKLASARDLKEQLD
KARIELDHAKREGNLAKAGELSYGVIPQLEKQLSEAEQAEEDGMMVEEAVRPEQIAQVVE
RWTGIPTAKMLEGEREKLLGMEDNLHKRVIGQDSAVRAVANAVRRARAGLNDENRPLGSF
LFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGGV
LTEAVRRRPYQVVLFDEVEKAHPEVFNVLLQVLDDGVLTDGQGHRVDFKQTLIIMTSNLG
SQALSQLPEGADAASAKRDVMDAVRSHFRPEFLNRLDEIVVFDRLSRDQMDGIVDIQMGR
LTKRLASRKIRLELDEDAKKWLADEGYDPVYGARPLKRVIQKALQDPLAEALLAGDILDG
STVPVSAGADGLIIGDRVGNSNRERPDDAVVH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcgaagttcaccgagcggtcgcgcggctttcttcaggcggcgcagacgatc
gcaatgcgggagagccaccagaaactggcgcccgaacatgttctgaaagcattgatggat
gacgaccaggggcttgcgagcaacctgatcaagcgcgcaggcggtaaccctcagcgcgtg
gtgcaggcgctcgagctgtctctgggcaagattccgaaggtgtcgggcgatgccggccag
gtctacatggacaaccagaccgggaaggttctggacgaggccgagaagctggccaagaag
gccggtgacagtttcgtgcccgtggagcgcctgctgaccgcgatggccgtggtgaagagc
ccggcgaaggacgcgctggagcagggcggggtgagtgcgcagagccttaacgaggcggtg
aacgacatccgcaagggccgcaccgccgacagcgcgagtgccgaggatacctatgaggcg
ctggagaaatacgcgcgcgacctgaccaaggccgccgaggatggcaagatcgacccgatc
atcggccgcgacgacgagatccgccgcgcgatgcaggtgttgagccgccggaccaagaac
aaccccgttctgatcggtgagccgggcgtcggcaagaccgcgattgccgaggggcttgcc
ctgcggatcgtcaatggcgacgtgccggagagccttcagaacaagcgtctgctgtcgctc
gacatgggcgcgctgattgccggggcgaagtatcgcggtgagttcgaggagcggctgaag
gccgtgctgaacgagatcaccaatgccgcgggcgagatcatcctgttcatcgacgagatg
cacacgcttgtgggcgcgggcaagacggatggcgcgatggatgccgccaacctgatcaag
ccggcgctggcacggggtgaactgcactgtatcggtgcgacgacgctcgacgaataccgc
aagcatgtcgagaaggacgcggcccttgcccgccggttccagccgctgatggtgtcggag
ccgacggtggaggatacgatcagtatcctgcggggcatcaaggagaagtacgagctgcac
cacggtgtgcggatctcggacagcgcgcttgtgtctgccgcgacgctgtcaaaccgctat
atcaccgaccggttcctgccggacaaggcgatcgaccttgtcgacgaggcggccagccgg
ttgcggatggaggtggacagcaaacccgaggagcttgacgcgctcgaccgcgatatcctg
cagaagcagatcgaggccgaggcgctgcgcaaggaggatgatgccgccagcaaggaccgg
ctcgagaagctcgagaaggaactggccgagttgcaggagaaatccgccgagatgaccgcg
cagtggcaggccgagcgggacaagcttgccagcgcgcgcgacctgaaggagcaactcgac
aaggcgcggatcgaactggatcacgccaagcgggagggcaacctcgccaaggccggtgag
ctttcctatggcgtcattccgcagcttgagaaacagctttccgaggccgaacaggccgag
gaagacggcatgatggtggaagaggccgtgcggccggagcagatcgcccaggtggtcgag
cgctggacgggtattcccaccgccaagatgctggaaggcgagcgcgagaagctgttgggc
atggaagataacctgcacaagcgggtgatcggccaggacagtgccgtgcgggccgtggcc
aacgcggtgcgccgggccagggcgggtctcaacgacgagaaccggccgctgggcagcttc
ctgttcctcgggccgacgggtgtcgggaagaccgagctcacgaaagccgtcgccgagttc
ctgttcgacgatgacagcgcgatggtgcggatcgacatgagcgagttcatggagaaacac
gccgtcgcccgcctgatcggtgccccgccgggttatgtcgggtacgaggagggtggcgtt
ctgaccgaagccgtccgccgccggccctaccaggtggtgctgttcgacgaggtcgagaag
gcgcatccggaggtgttcaacgtgctgttgcaggtgcttgacgacggggtcttgaccgat
ggtcagggtcaccgggtcgacttcaagcagacgctgatcatcatgacgtcgaaccttggg
tcgcaggcgttgagccagttgcctgagggggcggacgccgcttcggccaagcgggacgtg
atggatgcggtccggtcgcatttccggcccgagttcctgaaccggctggacgagatcgtg
gtcttcgaccggctgtcgcgtgatcagatggacggcatcgtcgatatccagatgggccgc
ctgaccaagcgcctggcaagccggaagatccggctggagctggacgaggatgccaagaag
tggctggccgacgaggggtacgacccggtctatggcgcgcggccgctgaagcgggtgatc
cagaaggccttgcaggatccgctggccgaggcgttgctggccggcgatatcctcgacggc
agcacggtgccggtgagtgccggggccgacgggctgatcatcggcgaccgggtggggaat
tccaaccgggaacgacctgacgacgcggtcgtgcattaa
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