Roseovarius indicus: RIdsm_04545
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Entry
RIdsm_04545 CDS
T06222
Symbol
sucD_2
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rid
Roseovarius indicus
Pathway
rid00020
Citrate cycle (TCA cycle)
rid00640
Propanoate metabolism
rid00660
C5-Branched dibasic acid metabolism
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
Module
rid_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rid_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIdsm_04545 (sucD_2)
00640 Propanoate metabolism
RIdsm_04545 (sucD_2)
00660 C5-Branched dibasic acid metabolism
RIdsm_04545 (sucD_2)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RIdsm_04545 (sucD_2)
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Ortholog
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
QEW28706
UniProt:
A0A0T5P2D5
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All DBs
Position
4696962..4697846
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AA seq
294 aa
AA seq
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MAVLVDENTKVICQGLTGSQGTFHTEQAIAYGTKMVGGVTPGKGGQTHLDLPVYNSVHEA
IHETGANASVIYVPPPFAADSILEAIDAEMPLIVCITEGIPVLDMMRVKRALETSKSTLI
GPNCPGIITPDACKIGIMPGHIHKRGTCGVVSRSGTLTYEAVKQTSDVGLGQSTCVGIGG
DPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEDAAQFLKDEAKKGRKKPVAGFIAG
RTAPPGRRMGHAGAIVAGGKGGADDKIEAMRSAGIVVSESPAGLGEAVLEAIGK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcctcgtagacgaaaacaccaaagtgatctgtcagggcctcaccggctcgcag
ggcaccttccacaccgaacaggccatcgcctacggcaccaagatggtcggcggcgtcacc
cccggcaagggcggtcagacccatctcgacctgccggtctacaactcggtccacgaagcg
atccacgaaaccggcgccaatgcctcggtgatctacgtgccgccgccgtttgcggccgac
tcgatccttgaagcgatcgacgccgaaatgcccctcatcgtctgcatcaccgagggcatc
ccggtgctcgacatgatgcgcgtaaagcgggcgctggaaacctcgaaatccaccctgatc
gggcccaactgcccgggcatcatcacccccgatgcctgcaagatcggcatcatgccgggc
cacatccacaagcgcggcacctgcggcgtcgtctcccgctccggcacgctcacctacgag
gcggtcaagcagacctccgacgtgggcctgggccagtcgacctgcgtcggcatcggcggc
gacccgatcaagggcaccgaacatatcgacgtgctcgaatggttcctcgccgatgacgag
accgagtcgatcatcatgatcggcgagatcggcggctcggccgaggaagacgcggcccag
ttcctgaaagacgaggccaagaagggccgcaagaaaccggtcgcgggcttcatcgccggc
cgcaccgcgcctccgggccgccgcatgggccacgccggcgccatcgtcgcgggcggcaag
ggcggcgccgacgacaagatcgaagccatgcgctcggccggcatcgtcgtctccgaaagc
cccgcgggcctcggcgaagcggtgctcgaagcgatcgggaaatag
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