Roseovarius indicus: RIdsm_04554
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Entry
RIdsm_04554 CDS
T06222
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rid
Roseovarius indicus
Pathway
rid00010
Glycolysis / Gluconeogenesis
rid00020
Citrate cycle (TCA cycle)
rid00260
Glycine, serine and threonine metabolism
rid00280
Valine, leucine and isoleucine degradation
rid00310
Lysine degradation
rid00380
Tryptophan metabolism
rid00620
Pyruvate metabolism
rid00630
Glyoxylate and dicarboxylate metabolism
rid00640
Propanoate metabolism
rid00670
One carbon pool by folate
rid00785
Lipoic acid metabolism
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
rid01120
Microbial metabolism in diverse environments
rid01200
Carbon metabolism
rid01210
2-Oxocarboxylic acid metabolism
rid01240
Biosynthesis of cofactors
Module
rid_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rid_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rid_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rid_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rid_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RIdsm_04554 (lpd3)
00020 Citrate cycle (TCA cycle)
RIdsm_04554 (lpd3)
00620 Pyruvate metabolism
RIdsm_04554 (lpd3)
00630 Glyoxylate and dicarboxylate metabolism
RIdsm_04554 (lpd3)
00640 Propanoate metabolism
RIdsm_04554 (lpd3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIdsm_04554 (lpd3)
00280 Valine, leucine and isoleucine degradation
RIdsm_04554 (lpd3)
00310 Lysine degradation
RIdsm_04554 (lpd3)
00380 Tryptophan metabolism
RIdsm_04554 (lpd3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RIdsm_04554 (lpd3)
00670 One carbon pool by folate
RIdsm_04554 (lpd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rid04147
]
RIdsm_04554 (lpd3)
Enzymes [BR:
rid01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RIdsm_04554 (lpd3)
Exosome [BR:
rid04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RIdsm_04554 (lpd3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_8
GIDA
DAO
HI0933_like
Thi4
AlaDh_PNT_C
FAD_binding_3
3HCDH_N
Lys_Orn_oxgnase
Lycopene_cycl
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QEW28715
UniProt:
A0A0T5P2J4
LinkDB
All DBs
Position
4705765..4707159
Genome browser
AA seq
464 aa
AA seq
DB search
MASYDVIVIGSGPGGYVAAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHSSHML
HEAEHNFAKMGLKGKAPSVDWKEMLAYKDDVIGQNTKGIEFLFKKNKIDWLKGWGSIPEA
GKVKVGDDTHESKNIIIASGSEASSVPGADVTIDEKIVVTSTGALELPKVPKKMVVIGAG
VIGLEMGSVYARLGTQVTVVEYLDHITPGMDGEVQKNFQKLLKKQGLEFVMGSAVTSVET
LKTKAKVNYKLRKDDSEHQLDADVVLVATGRKPYTDGLGLDALGIELTKGGQIKTDEHWQ
TNVKGIYAIGDAITGPMLAHKAEDEGMAAAEVIAGKHGHVNYNVIPSVIYTHPEVAAVGQ
TEEQLKDEGRAYKVGKFSFMGNGRAKAVFAGDGFVKLIADKETDRILGCHIIGPSAGDLI
HEVCVAMEFGASAEDLALTCHAHPTFSEAVREAALACGDGPIHS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctatgacgtcatcgtaatcggctccggccccggcggctatgtcgccgccatc
cgctgcgcccagctgggcctgaaaacggcctgcgtggaaggccgcgacaccctcggcggc
acctgcctcaacgtgggctgcatcccctccaaggcgctgctgcactcgtcccacatgctg
cacgaggccgagcacaatttcgccaagatgggcctcaagggcaaggcgccctccgtcgac
tggaaagagatgctcgcctacaaggacgacgtcatcggccagaacaccaagggcatcgaa
ttcctgttcaaaaagaacaagatagactggctcaagggctggggttcgatccccgaggcg
ggcaaggtcaaggtcggcgacgacacccacgagtccaagaacatcatcatcgcctcgggc
tccgaggcctccagcgtcccgggcgccgacgtcaccatcgacgagaagatcgtcgtcacc
tccaccggcgccctggaactgccgaaagtcccgaagaagatggtcgtcatcggcgccggc
gtcatcggcctcgagatgggcagcgtctacgcccgcctcggcacgcaggtgaccgtcgtc
gaatatctcgaccacatcacccccggcatggatggcgaggttcagaagaacttccagaaa
ctgctgaaaaagcaagggcttgagttcgtcatgggaagcgccgtcacctcggtcgagacg
ctcaagaccaaggccaaggtgaactacaagctgcgcaaggacgacagcgaacaccagctc
gacgccgacgtcgtcctcgtcgccaccggccgcaagccttataccgacggcctcggcctc
gatgcccttggcatcgagctcaccaagggcggccagatcaagaccgacgaacactggcag
accaacgtgaaaggcatctacgccatcggcgacgccatcaccggcccgatgctcgcccac
aaggccgaagacgagggcatggccgcggcggaagtgatcgccggcaagcatggccacgtc
aattacaacgtcatccccagcgtgatctacacccaccccgaggtcgccgccgtcggccag
accgaggagcaactgaaggacgagggccgcgcctacaaggtcggcaagttctccttcatg
ggcaacggccgcgccaaggcggtctttgccggcgacggcttcgtcaagctcatcgccgac
aaggaaaccgaccgcatcctcggctgccacatcatcggcccctcggccggcgacctgatc
cacgaggtctgcgtcgcgatggaattcggcgcctcggccgaggacctggcgctcacctgc
cacgcccacccgaccttctcggaagcggtacgcgaggccgcgctggcctgcggcgacggg
ccgatccactcgtaa
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