KEGG   Roseovarius indicus: RIdsm_04554
Entry
RIdsm_04554       CDS       T06222                                 
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rid  Roseovarius indicus
Pathway
rid00010  Glycolysis / Gluconeogenesis
rid00020  Citrate cycle (TCA cycle)
rid00260  Glycine, serine and threonine metabolism
rid00280  Valine, leucine and isoleucine degradation
rid00310  Lysine degradation
rid00380  Tryptophan metabolism
rid00620  Pyruvate metabolism
rid00630  Glyoxylate and dicarboxylate metabolism
rid00640  Propanoate metabolism
rid00670  One carbon pool by folate
rid00785  Lipoic acid metabolism
rid01100  Metabolic pathways
rid01110  Biosynthesis of secondary metabolites
rid01120  Microbial metabolism in diverse environments
rid01200  Carbon metabolism
rid01210  2-Oxocarboxylic acid metabolism
rid01240  Biosynthesis of cofactors
Module
rid_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rid_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rid_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rid_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rid_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rid00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RIdsm_04554 (lpd3)
   00020 Citrate cycle (TCA cycle)
    RIdsm_04554 (lpd3)
   00620 Pyruvate metabolism
    RIdsm_04554 (lpd3)
   00630 Glyoxylate and dicarboxylate metabolism
    RIdsm_04554 (lpd3)
   00640 Propanoate metabolism
    RIdsm_04554 (lpd3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RIdsm_04554 (lpd3)
   00280 Valine, leucine and isoleucine degradation
    RIdsm_04554 (lpd3)
   00310 Lysine degradation
    RIdsm_04554 (lpd3)
   00380 Tryptophan metabolism
    RIdsm_04554 (lpd3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RIdsm_04554 (lpd3)
   00670 One carbon pool by folate
    RIdsm_04554 (lpd3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rid04147]
    RIdsm_04554 (lpd3)
Enzymes [BR:rid01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RIdsm_04554 (lpd3)
Exosome [BR:rid04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RIdsm_04554 (lpd3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 NAD_binding_8 GIDA DAO HI0933_like Thi4 AlaDh_PNT_C FAD_binding_3 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QEW28715
UniProt: A0A0T5P2J4
LinkDB
Position
4705765..4707159
AA seq 464 aa
MASYDVIVIGSGPGGYVAAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHSSHML
HEAEHNFAKMGLKGKAPSVDWKEMLAYKDDVIGQNTKGIEFLFKKNKIDWLKGWGSIPEA
GKVKVGDDTHESKNIIIASGSEASSVPGADVTIDEKIVVTSTGALELPKVPKKMVVIGAG
VIGLEMGSVYARLGTQVTVVEYLDHITPGMDGEVQKNFQKLLKKQGLEFVMGSAVTSVET
LKTKAKVNYKLRKDDSEHQLDADVVLVATGRKPYTDGLGLDALGIELTKGGQIKTDEHWQ
TNVKGIYAIGDAITGPMLAHKAEDEGMAAAEVIAGKHGHVNYNVIPSVIYTHPEVAAVGQ
TEEQLKDEGRAYKVGKFSFMGNGRAKAVFAGDGFVKLIADKETDRILGCHIIGPSAGDLI
HEVCVAMEFGASAEDLALTCHAHPTFSEAVREAALACGDGPIHS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcaagctatgacgtcatcgtaatcggctccggccccggcggctatgtcgccgccatc
cgctgcgcccagctgggcctgaaaacggcctgcgtggaaggccgcgacaccctcggcggc
acctgcctcaacgtgggctgcatcccctccaaggcgctgctgcactcgtcccacatgctg
cacgaggccgagcacaatttcgccaagatgggcctcaagggcaaggcgccctccgtcgac
tggaaagagatgctcgcctacaaggacgacgtcatcggccagaacaccaagggcatcgaa
ttcctgttcaaaaagaacaagatagactggctcaagggctggggttcgatccccgaggcg
ggcaaggtcaaggtcggcgacgacacccacgagtccaagaacatcatcatcgcctcgggc
tccgaggcctccagcgtcccgggcgccgacgtcaccatcgacgagaagatcgtcgtcacc
tccaccggcgccctggaactgccgaaagtcccgaagaagatggtcgtcatcggcgccggc
gtcatcggcctcgagatgggcagcgtctacgcccgcctcggcacgcaggtgaccgtcgtc
gaatatctcgaccacatcacccccggcatggatggcgaggttcagaagaacttccagaaa
ctgctgaaaaagcaagggcttgagttcgtcatgggaagcgccgtcacctcggtcgagacg
ctcaagaccaaggccaaggtgaactacaagctgcgcaaggacgacagcgaacaccagctc
gacgccgacgtcgtcctcgtcgccaccggccgcaagccttataccgacggcctcggcctc
gatgcccttggcatcgagctcaccaagggcggccagatcaagaccgacgaacactggcag
accaacgtgaaaggcatctacgccatcggcgacgccatcaccggcccgatgctcgcccac
aaggccgaagacgagggcatggccgcggcggaagtgatcgccggcaagcatggccacgtc
aattacaacgtcatccccagcgtgatctacacccaccccgaggtcgccgccgtcggccag
accgaggagcaactgaaggacgagggccgcgcctacaaggtcggcaagttctccttcatg
ggcaacggccgcgccaaggcggtctttgccggcgacggcttcgtcaagctcatcgccgac
aaggaaaccgaccgcatcctcggctgccacatcatcggcccctcggccggcgacctgatc
cacgaggtctgcgtcgcgatggaattcggcgcctcggccgaggacctggcgctcacctgc
cacgcccacccgaccttctcggaagcggtacgcgaggccgcgctggcctgcggcgacggg
ccgatccactcgtaa

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