Roseovarius indicus: RIdsm_04639
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Entry
RIdsm_04639 CDS
T06222
Symbol
slt_3
Name
(GenBank) Soluble lytic murein transglycosylase precursor
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
RIdsm_04639 (slt_3)
Enzymes [BR:
rid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RIdsm_04639 (slt_3)
Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RIdsm_04639 (slt_3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QEW28799
UniProt:
A0A5P3AHI5
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Position
4799511..4801469
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AA seq
652 aa
AA seq
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MMRCLAALLMFLSLSAAAPAQEEDVRIAPRPLQSAFDAIRNGRWDTASRIAERDGPAAVS
IIEWIRLREGRGTPEEVLAFVEEHPDWPGISYLRKRSEEVMTHADFDDVLAFYSDYRPQT
GEGVLNYARALTARGQEGEAAATVVLAWRTMDLSTAEHNAFLDAHADLLKPHHESRMQMA
VWRGLRDVQQMLPLVSKETRALVEARQKIERGTALKDSDLPEGGATDAGIAYERFNQHIK
KGRSDDAIALMIKQSKIEDGLGEPDRWAGWRRYLARSKMREGDIDTAYQLAAIHQLVDGS
NYADLEWLSGYLALTYLEAPELALDHFQRFRAAVETPISLGRAGYWIGRAQDALGDTEAA
QLSYAFGGEYQTSFYGLLAAERAGMPPDPALAGAAPDPDWRNAPFAQSPLFKAGVLLLST
DRISLAEQFFVALTDTLEEDEINRLGHALDTLDEPHLEVMVGKAAAQRGLVVPGPYYALH
PMRQMDLPVPVELALAIARRESEFDHRVQSGAGAQGLMQLMPGTASDMARSLGIQHTRSR
VLSDWRYNATLGSAYLAQLVNRFDGNIVMVSAGYNAGPGRPLRWMKEYGDPRQGERDIID
WIEHIPFRETQNYVMRVAESLPIYRARLGKNPLPVPFSEELSGGTLRQLALD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgttgcctcgctgccttgttgatgtttttgagcctgtccgccgcggcgccggca
caggaggaagacgtgcgaatcgcgccacgtcccctgcaaagcgccttcgacgcaatccgg
aacggccgctgggacaccgccagccgcatcgccgagcgggacggccccgccgccgtgtcc
atcatcgagtggattcgtctgcgcgaagggcgcggaacacccgaagaggttctggccttc
gtcgaagagcatcccgactggcccggcatctcctacctgcgcaagcgcagcgaagaggtg
atgacccacgccgatttcgacgacgttctggccttctacagcgattaccgcccccagacc
ggcgaaggcgttctgaactacgcccgcgccctgaccgcccgcggccaggaaggcgaggcc
gccgccacggtcgttctggcatggcgcacgatggacctttcgaccgccgagcataacgcc
ttcctcgacgcccatgccgatctcctgaaaccgcatcacgagtcgcggatgcagatggcg
gtctggcgcggcctgcgcgacgtgcagcagatgctgccgctggtcagcaaggaaacccgc
gcgctggtcgaggcccgtcagaagatcgagcgcggcacagccctgaaggacagcgacctg
cccgagggcggcgccaccgatgccggcatcgcctacgagcgtttcaaccagcatatcaag
aagggccgcagcgacgacgcgattgccctgatgatcaagcagagcaagatcgaagacggg
cttggcgagcccgaccgctgggccggatggcggcgctacctcgcccgctcgaagatgcgc
gagggcgatatcgacaccgcctatcagctcgccgcgattcaccagctggtcgacgggtcc
aactacgccgatctcgaatggctgtcgggctacctggcgctcacctatctcgaggcgccc
gaactggccctcgaccatttccagcggttccgcgcggcggtcgaaacgcccatctcgctg
ggccgcgccgggtactggatcggccgcgcccaggatgccctcggcgacaccgaagcggcc
cagctctcctacgccttcggcggcgaataccagaccagcttctacggccttctggccgcc
gaacgcgccggcatgccccccgacccggccctggccggcgcggcccccgatcccgattgg
cgcaacgcccccttcgcccagtctccgctcttcaaggcgggcgttctgctgctcagcacc
gaccgcatctctctggccgaacagttcttcgtggccctgaccgacacgctggaagaagac
gagatcaaccgcctcggccatgccctcgacacccttgacgagccccatctcgaggtcatg
gtcggcaaggccgccgcccagcgcggcctcgtcgtgcccgggccctattacgccctccac
ccgatgcggcagatggacctgcccgttcccgtcgaactggccctcgccatcgcccgccgg
gaaagcgaattcgaccaccgcgtccaaagcggcgcaggcgcgcaaggcctcatgcagctc
atgccgggcaccgcctccgacatggcccggtcccttggcatccagcacacccgctctcgc
gtgctgtccgactggcgctacaatgcgacgctcggctcggcctacctggcccagctggtc
aaccggttcgacgggaatatcgtcatggtctcggcaggctacaacgccgggccgggccgc
ccgctgcgctggatgaaggaatacggcgacccccggcagggcgagcgcgacatcatcgac
tggatcgagcacatccccttccgcgaaacccagaactacgtgatgcgcgtcgccgaaagc
ctgccgatctaccgcgcccggcttgggaagaacccgctgccggtgccattctcggaagaa
ctctccggcggaaccctacgccagctggcgctggattag
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