Roseovarius indicus: RIdsm_04986
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Entry
RIdsm_04986 CDS
T06222
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rid03016
]
RIdsm_04986 (truB)
Enzymes [BR:
rid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RIdsm_04986 (truB)
Transfer RNA biogenesis [BR:
rid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RIdsm_04986 (truB)
Prokaryotic type
RIdsm_04986 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEW29144
UniProt:
A0A0T5PE44
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All DBs
Position
complement(5123446..5124366)
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AA seq
306 aa
AA seq
DB search
MGRKRKGRDISGWLVVDKPAGMTSTAVVNKVRWALQAKKAGHAGTLDPAATGVLAVALGE
ATKTVPFITDALKAYEFSVRLGQATNTDDEEGEVIASSDSRPDDEAIKAALGAFIGDIMQ
VPPKYSAVKIDGQRAYKLAREGEEVEIEARPLWVEELVMTDRPDPDHVTLEMVCGKGGYV
RAIARDLGEALGCYGHVAWLRRIWSGPFEAEEGISIEEVDRLAHTPELDAWLRPLEDGLE
GLPQVSCTEEGAVRLRNGNPGMVIARDVEYGDECWAAHKGRAVAVGRFKGGELHPSRVFN
TGPLEG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaacgcaagggtcgcgacatttctggctggctggtggtcgacaagcccgcg
ggcatgacctcgactgccgtggtcaacaaggtgcgctgggcgcttcaggcgaagaaggcg
ggtcatgccggcacgctcgacccggcggcgacaggtgtgctggccgtggcgctgggcgag
gcgaccaagacggtgccgttcatcaccgatgcgctgaaggcctacgagttttccgtgcgg
ctggggcaggccaccaataccgacgacgaggagggcgaggtgatcgcctcctccgacagc
cggcccgacgacgaggccatcaaggcggcgctgggggccttcatcggcgatatcatgcag
gtgccgccgaaatactctgccgtgaagatcgacggacagcgcgcctacaagctggcgcgc
gagggcgaggaggtcgagatcgaggcgcgcccgctctgggtcgaggaactggtgatgacc
gaccgccccgatcccgatcatgtgacgctggaaatggtctgtggcaagggcggctatgtg
cgggccattgcccgcgacctgggcgaggcgctgggctgttacggacatgtcgcgtggctg
cgccgcatctggtcggggccgttcgaggcggaagaggggatcagcatcgaagaggtcgac
aggctggcgcacacgccggaactcgacgcctggctgcggccgctggaagacgggctggag
gggctgccgcaggttagctgtaccgaggaaggcgccgtgcggctgcgcaatggcaacccc
ggcatggtgatcgcccgcgacgtcgaatatggcgacgagtgctgggccgcccacaagggg
cgcgccgtcgcggtgggccggttcaaggggggcgaactgcacccctcgcgcgtgttcaac
accgggccgctggagggctga
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