Roseovarius indicus: RIdsm_05026
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Entry
RIdsm_05026 CDS
T06222
Name
(GenBank) Vacuole effluxer Atg22 like protein
KO
K06902
MFS transporter, UMF1 family
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rid04131
]
RIdsm_05026
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_05026
Membrane trafficking [BR:
rid04131
]
Autophagy
Other autophagy associated proteins
Others
RIdsm_05026
Transporters [BR:
rid02000
]
Major facilitator superfamily (MFS)
Unknown transporters
Unknown major facilitator-1 (UMF1) [TC:
2.A.1.24
]
RIdsm_05026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG22
MFS_1
DUF1418
DUF7807
Motif
Other DBs
NCBI-ProteinID:
QEW29184
UniProt:
A0A0T5PFD2
LinkDB
All DBs
Position
complement(5162466..5163848)
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AA seq
460 aa
AA seq
DB search
MAEPSRRKRIWGWYFFDWASQPYHTLLVTFVFGPFFASVASEYFMNAGLVEEAADARAQS
LWSMCLTVTGLIIGFGAPIIGALADTAGRRLPWILAFSAMYVVGAAGIWWTQPDGSNMLW
ALSCFGVGFIGAEYALIFVNSQLPSLAPQEETGAISGSGFAFGYLGGIVALAIMLTLFFD
DGGKTLLGLDPALGLDPDAREGTRFVGPFTAVWFAVFMIPYFLWVRDTGPARKGRGVGDA
LRLLKKSIVGLKKRVSLSVYLGSSMFYRDALNGLYGFGGTYAILVLNWSIVSVGIFGIVG
AISAAAFSWVGGRFDRAFGPKPVIIVAILGLMLVCFTVVGMDRTQFFGMPLAEGSALPDM
VFFGCGVLIGGLGGTLQASSRSLMVRHTDPAAPTESFGLYGLSGRATAFMAPALIGLVTT
LSGSARIGVSPVILLFLIGLVLLRWVKAEGDRDTWSVTSN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgtcgcgtcgcaaacgcatctggggctggtactttttcgactgggccagc
cagccgtatcacacgttgctggtgaccttcgtcttcgggccgttcttcgcctcggtggcg
tcggaatacttcatgaacgcgggccttgtcgaagaggcggcggatgcccgggcgcaaagc
ctgtggtcgatgtgcctgacggtgacggggctgatcatcgggttcggcgcaccgatcatc
ggcgcgctggccgataccgccgggcggcggcttccgtggatcctggcgttctcggcgatg
tacgtggtgggcgccgccggcatctggtggacccagccggacgggtcgaacatgctctgg
gcgctgtcctgtttcggcgttggcttcatcggggcggaatacgcgctgatcttcgtgaac
tcgcagcttccctcgctcgccccgcaggaagagacgggggcgatctcgggctccggtttc
gcctttggctacctgggcgggatcgtggcgctggcgatcatgctgacgctgttcttcgac
gatggtggcaagacgcttctgggcctcgacccggcgctgggtcttgacccggacgcgcgc
gagggcacgcgcttcgtcgggcccttcacggcggtctggttcgcggtcttcatgatcccc
tatttcctgtgggtgcgcgataccggcccggcccgcaaggggcgcggcgtaggcgatgcg
ttgcggctgctgaagaaatccattgtggggctgaagaaacgggtcagcctgtcggtctat
ctcggctcgtcgatgttctaccgcgacgcgctgaacgggctttacgggttcgggggcacc
tacgcgatcttggtgctgaactggagcatcgtctcggtcggcatcttcggcatcgtcggc
gccatttcggcggcagcgttcagctgggtcggcggccggttcgaccgggccttcgggccc
aagcccgtgatcatcgtggcgatcctcgggctgatgctggtctgcttcaccgtggtgggc
atggatcggacgcagttcttcgggatgccgctggccgaaggctcggccctgcccgacatg
gtgttcttcggctgcggcgtgctgatcggcggcctgggcggcacgttgcaggcgtcgagc
cggtcgttgatggtgcgccacaccgaccccgccgcgcccaccgaaagcttcgggctttat
ggcctctcaggccgtgcgacggccttcatggcgcccgcgctcatcggccttgtcaccacg
ctgagcggcagtgcgcggatcggcgtctcgccggtaattctccttttcctgatcggcctc
gtcctgctacgctgggtgaaagcagaaggggacagggatacatggtccgtcacgtcaaac
tga
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