Roseovarius indicus: RIdsm_05173
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Entry
RIdsm_05173 CDS
T06222
Symbol
kdsB_2
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rid
Roseovarius indicus
Pathway
rid00541
Biosynthesis of various nucleotide sugars
rid01100
Metabolic pathways
rid01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RIdsm_05173 (kdsB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rid01005
]
RIdsm_05173 (kdsB_2)
Enzymes [BR:
rid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RIdsm_05173 (kdsB_2)
Lipopolysaccharide biosynthesis proteins [BR:
rid01005
]
Lipid A
RIdsm_05173 (kdsB_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
ADH_zinc_N
IspD
NYN_YacP
DUF374
Dna2_Rift
Motif
Other DBs
NCBI-ProteinID:
QEW29329
UniProt:
A0A0T5PDN1
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All DBs
Position
complement(5316648..5317448)
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AA seq
266 aa
AA seq
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MGVLIVIPARYASSRYPGKPLVELTGATGEARSLIERSWQAACAVEGADRVVVATDDDRI
RAVAEGFGAEVVMTSEDCRNGTERCAEALDALGGGYDIVVNLQGDAPLTPPWFVEELIAG
MRADAGADVATPVLVCDGKAHRSFLEDRAQGRVGGTTAVFTRDRHALYFSKEVVPYTGTI
YADDQPTPVYHHVGVYAYRPEALRAYPALETGPLEQLEGLEQLRFMENGHTVLCVEVEAR
GRQFWELNNPEDVDRIEDMMQAMGLA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgctgatcgtcattccggcgcgctatgcgtcgagccgttaccccggaaagccg
ttggtggagctgaccggggccacgggcgaggcgcggtcgctgatcgagcggagctggcag
gcggcctgtgccgtcgagggggccgaccgggtggtcgtggccaccgatgacgaccgcatc
cgcgcagtcgccgaggggttcggcgccgaggtggtgatgacctcggaggactgccggaat
ggcacggagcgctgtgccgaggcgctggatgcgctgggcgggggttatgatatcgtcgtc
aacctgcagggcgacgcgccgctgacgccgccgtggttcgtggaagagctgattgccggt
atgcgcgccgacgcgggggccgacgtggcgacgccggtgctggtgtgcgacgggaaggcg
catcgcagttttctcgaagaccgggcgcaggggcgcgtgggcgggacgacggcggttttc
acgcgtgaccgccatgcgctttacttctcgaaggaggtcgtgccctacacgggcacgatc
tatgccgacgatcagccgacgccggtttatcaccatgtcggtgtctacgcctaccgcccc
gaggccctgcgcgcctatccggcgctcgagaccgggccgctggaacagctggaagggctg
gagcagctgcgcttcatggagaacgggcacacggtgctgtgcgtcgaggtcgaggcgcgg
ggccggcagttctgggagttgaacaatcccgaagatgtggacaggatagaggacatgatg
caagcgatgggccttgcctga
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