Roseovarius indicus: RIdsm_05196
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Entry
RIdsm_05196 CDS
T06222
Symbol
ddc
Name
(GenBank) L-2,4-diaminobutyrate decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rid
Roseovarius indicus
Pathway
rid00350
Tyrosine metabolism
rid00360
Phenylalanine metabolism
rid00380
Tryptophan metabolism
rid01100
Metabolic pathways
rid01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
RIdsm_05196 (ddc)
00360 Phenylalanine metabolism
RIdsm_05196 (ddc)
00380 Tryptophan metabolism
RIdsm_05196 (ddc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rid04147
]
RIdsm_05196 (ddc)
Enzymes [BR:
rid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
RIdsm_05196 (ddc)
4.1.1.105 L-tryptophan decarboxylase
RIdsm_05196 (ddc)
Exosome [BR:
rid04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RIdsm_05196 (ddc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
QEW29352
UniProt:
A0A0T5PDM6
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All DBs
Position
complement(5342789..5344207)
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AA seq
472 aa
AA seq
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MTKPGYRIDPADPEAFRRAFHELADACLERVEQARDLPWIPKPDDIAETVALGPDEPGLS
EAEVFAIMRGEVMPYATGNTHPRFFGWVHGTGQPMGVAAEMVAATMNANLGGRDHGAMAV
EQAVIDWSRRQAGLPEGASGVLTTGTSQATILAMSAARMKLFGDAVRKDGIAGLGRIRVY
AAQGAHSCFEKAMEVMGHGSGAVRHIPLGPDGAMDMEALEAAIAEDRADRIVPMAVVGTA
GSVNTGNFDRLDAIAGLCRREGLWFHVDGAFGFWAVLAEDPWCDLVKGVDRADSIAADFH
KWIGVPYDCGMVLMRDGDLHRRTFSTRPAYLEGQVAGLGGGETWFTDYGLELSRGFRALK
VWAGIKAAGVPALSATISDNCRQAALMAELVEASEVLEMAQPVQANVCCFHVTQGDPSAI
ATALQLSGEAVFSTTTLNGRSCLRAAIVNHRTTEDDVRLAVAAVEREARAAG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcccggataccgcatcgatcccgccgacccggaggcttttcggcgcgcgttt
cacgagctggcggatgcctgtctcgaacgggtggagcaggcacgggatctgccgtggata
ccgaagccggacgatattgccgagacggtcgcgctgggccccgatgagccggggctgagc
gaggcggaggttttcgcgatcatgcgcggcgaggtgatgccctatgcgacgggcaacacg
catccgcggttcttcggctgggtgcatggcacgggccagccgatgggcgtggcggccgag
atggtggcggcgacgatgaacgccaatctcggcgggcgcgatcatggggcgatggcggtg
gaacaggccgtgatcgactggtcgcgccgacaggctgggttgccggagggggcgtcgggc
gtgctgaccaccggcacaagccaggcgaccattctggcgatgagcgcggcgaggatgaag
ctgttcggcgatgccgttcggaaggatggaatcgccggattgggccggatcagagtctat
gcggcgcagggcgcgcattcctgtttcgagaaggcgatggaagtgatggggcatggcagc
ggggccgtgcggcacattccgctgggccccgatggcgccatggatatggaggcgctggag
gcggcgattgccgaggatcgtgccgaccggatcgtgccgatggccgtggtgggcacggcc
gggtctgtgaataccggaaacttcgacaggctggatgcgattgccgggctgtgccgccgt
gaagggttgtggtttcacgtggacggcgcgttcgggttctgggcggttctggccgaggac
ccctggtgtgatctggtcaagggggtggaccgggccgacagcattgccgccgatttccac
aagtggatcggggtcccttatgattgcggcatggtgctgatgcgcgacggcgatctgcac
cggaggacgttttcgacccggcccgcttatctggaagggcaggttgcggggcttggcggg
ggcgagacgtggttcacggattacgggctggagttgagccgggggttccgggcgctgaag
gtctgggccgggatcaaggcggcgggggtgccggcgctttctgcgacaatcagcgacaat
tgccggcaggcggcgctgatggcggagctggtggaggcgtcggaggtgttggagatggcg
cagccggttcaggcgaacgtgtgctgtttccatgtaacgcagggcgacccgtcggcgatt
gccaccgcgctgcagctttcaggcgaggcggtgttttcgaccacgacactgaacgggcgg
tcgtgtcttcgggcggcgatcgtcaatcatcggacgacggaagatgacgtcaggctggcc
gtggcggcggtggaacgggaggcgcgtgcggcgggataa
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