Roseovarius indicus: RIdsm_05242
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Entry
RIdsm_05242 CDS
T06222
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rid
Roseovarius indicus
Pathway
rid03030
DNA replication
rid03430
Mismatch repair
rid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIdsm_05242 (dnaQ)
03430 Mismatch repair
RIdsm_05242 (dnaQ)
03440 Homologous recombination
RIdsm_05242 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rid03032
]
RIdsm_05242 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_05242 (dnaQ)
Enzymes [BR:
rid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIdsm_05242 (dnaQ)
DNA replication proteins [BR:
rid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIdsm_05242 (dnaQ)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIdsm_05242 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QEW29398
UniProt:
A0A0T5PDH3
LinkDB
All DBs
Position
5387877..5388575
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AA seq
232 aa
AA seq
DB search
MREIVLDTETTGFKPEEGDRIVEIGAVELYNHMPTGRTYHQYINPERSMPQEAFEVHGLG
DDFLRDKPVFARIAQDFVTFVADAKLVIHNAAFDMKFINAELGWVNLPSIPWEQAIDTLD
IARKKFPGSPASLDALCRRFGIDNSSRTLHGALLDSEILAEVYLELIGGRQPDLGMTTGQ
SSSASAQVEADSSWRPQPRPNALPSRLSEDEAAAHAAFVEAMGDGAMWNKTG
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcctcgacaccgaaaccaccggcttcaagcccgaggaaggcgaccgt
atcgtcgagatcggggctgtcgagctgtacaatcacatgccgactggccgcacctatcac
caatacatcaatcccgaacggtcgatgccgcaggaagcgttcgaagtgcatgggcttggc
gatgatttcctgcgcgacaaaccggtctttgcccggatcgcacaggattttgtgactttc
gtggccgatgcgaagctggtgatccataacgccgcctttgacatgaagttcatcaatgcc
gagcttggctgggtcaacctgccttcgattccatgggaacaggcaatcgatactctggat
atcgcgcgcaagaagttcccgggatcgccggccagcctcgatgcgctgtgccgccggttc
ggcatagacaattcgtcgcgcaccctgcacggcgccctgctcgactccgagatcctggcc
gaggtttatctggagctcattggcggccgccaaccggacctgggaatgacaacgggtcag
tcttcatccgccagcgctcaggtggaagctgacagttcatggcgccctcaaccgcgcccg
aacgccctgccctcgcggttgagcgaagacgaagccgccgcccacgcggcctttgtcgag
gcgatgggcgacggcgcgatgtggaacaaaaccggttaa
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