Roseovarius indicus: RIdsm_05296
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Entry
RIdsm_05296 CDS
T06222
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rid
Roseovarius indicus
Pathway
rid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIdsm_05296 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rid03400
]
RIdsm_05296 (mutM)
Enzymes [BR:
rid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RIdsm_05296 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RIdsm_05296 (mutM)
DNA repair and recombination proteins [BR:
rid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RIdsm_05296 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QEW29451
UniProt:
A0A0T5P712
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All DBs
Position
5441037..5441888
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLLPAMEGAVIARADVNRPDLRWPFPERMAERLSGQRVLNLRRRSKYI
LADLSSDETLLIHLGMSGRILISGDPLGQFVHDHPAPEKHDHVVFHMENGARITFNDPRR
FGAMDLIATPIADQHPLLQKLGPEPLGNAFHEAHLVAALKGRNTPIKSALLDQRIVAGLG
NIYVCEALYRARISPKRRAGAISAARIAGLVPIIRDVLTDAIAAGGSSLRDYRRADGELG
YFQHSFDVYDREGQACRTPGCEGQVRRIVQSGRSSFYCARCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaggttgagaccgttcgccgcggccttttgcccgcgatggaaggg
gcggtgatcgctcgggccgatgtgaacaggcccgatctgcgctggccgtttccagagcgg
atggccgagcggctgtcggggcagcgggttctgaacctgcgcaggcggtcgaaatacatc
ctggctgacctgtcgtcggacgagaccttgctgattcacttgggcatgtcggggcgcatc
ctgatttcgggcgatccgttggggcagttcgtgcatgaccatccggcgccggagaagcat
gaccacgtggtgtttcacatggagaacggcgcgcggatcaccttcaacgacccgcgccgg
ttcggcgcgatggacctgatcgccacgccgattgccgaccagcatccgctattgcagaaa
ctggggcctgagcccttgggcaacgcctttcacgaggcgcacctcgtggcggcgctgaag
gggcggaacacgccgatcaagtcggcgcttctggaccagcgaatcgtggccggtttgggc
aatatctatgtctgcgaggcactttaccgggcccggatctcccccaaacgccgggccggg
gcgatatctgcggcgcggattgcagggctggtgccgatcattcgcgacgtgctgacggat
gccatcgccgccggcggctcctcccttcgcgattaccggcgggcggatggtgaactcggt
tattttcaacacagtttcgacgtttacgaccgcgaagggcaggcctgccgaacgccgggt
tgcgaagggcaagtgcgccgtatcgtacaatccggtaggtcgtccttctattgcgcccgc
tgtcaaagatag
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