Roseovarius indicus: RIdsm_05315
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Entry
RIdsm_05315 CDS
T06222
Name
(GenBank) Type I restriction-modification system methyltransferase subunit
KO
K26273
protein strawberry notch
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rid03036
]
RIdsm_05315
Chromosome and associated proteins [BR:
rid03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RIdsm_05315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QEW29470
UniProt:
A0A5P3AL84
LinkDB
All DBs
Position
pRIdsm_01:16042..20304
Genome browser
AA seq
1420 aa
AA seq
DB search
MSKPRTANPALAISEADLASALALIGTEIDHQPLRSSALARIMRETFHGSDAGGAWDWRI
AYDLMQAAAVQVLLRGNGVADDIAAAKLLASRLLTETRRSEQQIRLQQFSTPLPFAAMVL
RAAAIRKGETVLEPSAGTGALATFAARSGATLLLNEIDPFRQRLLRAVFGGEVTGHDGEH
TDDLLQTPVLPDVVVMNPPFASSVDRSRDKHIAAKHLIAAAKRLAPGGRLVAIMPPGFTP
ERDAAHWSRACGLLTPRLALTMPGQVYRKLGTSVETQLMVFDKVQEGGEMIRASVRGLDD
ALPFVDAVAATRPEMRPVQQAAVIPHGRPTVPSSAPRKTAAVPVAASKPRANAVRPLTFT
SLVIPRDNTPISDIYARYRPQRIEIAGAQEHPTPLVESIAMASVAPPMPSNTGSDDLRLP
ARLIEEGHLSEAQLETIIMAHDAHGRDLPGRFTIDDDQTKLTRADDDPDARAFRLGYFLG
DGTGCGKGRECAGLILVNWLSGRRKAIWVSKSATLIEDAIRDWTDLGGSPADIQPLSKWK
PDQPVPMGDGILFVTYATLRSAGKCGTTRLSQILDWMGADFEGVLAFDEAHAMQNAAGSE
QGRGVKPSQQGLAGLRLQLAAPRARVFYISATGATSVHNLAYAARLGLWGQDPEYPFPSR
EGFVSAMEAGGVAAMEVVARDLKTLGLYTARALSFDGVEYDVLEHALTSAQIEIYDAYAA
SFRTIHHNLEAALTATGVNDASGETNASAARASAKSRFESTKQRFFNHLLMGMKAPSIIR
AIEDDLAAGKACVIQVVSTGESLLKRRLETMDPEDELVEGALTPRDYVLGYLEQAFPIHA
QKLVEIDGNMVAEPLRDETGALVVSREALALRDAAMMELMTLAPIPSALDQILWAFGDEA
VAEVTGRSIRPLKAEDGHLFIEKRAASSNSSETQAFMDGEKDILIFSDAGGTGRSYHAAQ
TAKNQKRRRHYLLEPGWRADAAIQGLGRTHRSAQVSAPFFRVCTSDVHGEKRFTSTIAKR
LDQLGALTKGQRETGSQGMFREEDNLESPIARAALRGYFADLAAGRAEAMSYKSFTDWTA
LRLIDKDGVLLEELPPIQRFLNRVLALPIHMQNALFAEFMRRIADQTERARAAGTLDLGV
ETLRGEKIEQVSTEDLWTCPKSGAVTRIIGLEVTDPVHVLGAEEAISRNPDKLPMVNRAS
GRAALISARPMQMYDEDIVTLMRKVVRPNGSSYLEEARFTSSAWEDIERPEFAKLWDAEA
ASLPKTTTTKLYLLTGLLLPIWKDIPTTNERIYRVTPDGATAMIGRTLSEEGAAALRARF
LVSNPQTAQEMLTAALGTTAPVDLGRGLTLTRRRVAGEMRLELCGVDRGMIDGLKAMGCF
TEIIAFQLRVFLPHGDGIDTGSILARIVGQEASMTSEQAA
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccagaacggccaacccggctctcgcaatctccgaagccgatctcgcctct
gcgctagcgcttatcggcacggagatcgaccaccaacccctgcgcagctcagcgctcgca
cgcatcatgcgcgagacgtttcatggcagcgatgccgggggcgcctgggactggcgcata
gcctatgacctgatgcaggccgcggctgtccaagtgctgctgcgtgggaacggcgtggca
gatgacatcgccgctgcaaagctgcttgcctcgcggctgctgacggaaacccgccggtca
gagcagcagatccggctgcagcagttttccacgccgttacctttcgcggcaatggtcttg
cgggctgcggcgatccgcaagggcgagaccgtgctggagccctcggctggcaccggtgcc
ctggctactttcgccgcccggtccggtgccacgcttttgctcaacgagatcgaccctttt
cgccagcgcctcctgcgcgcggttttcggcggcgaggtgacgggccatgacggcgagcat
accgacgatctgctgcagacgccggttctacccgacgtcgtggtgatgaatccgcccttc
gcctcctcggtcgaccgatcccgcgacaagcacatcgctgccaaacatctcattgcggct
gcaaagcgcctggcaccaggtgggcgcctggtggcgatcatgccgccggggttcacgccc
gaacgcgatgccgcgcattggtcccgcgcctgcggtctcctgacgccacgattggcgctg
acgatgccggggcaggtctaccgcaagctcggcacctctgtcgaaacccagctcatggtc
ttcgacaaggtgcaggagggcggcgagatgatccgcgccagtgtccggggcttggatgat
gcccttccttttgtcgacgccgtggccgcaacccggcccgagatgcgccccgtgcaacag
gcggcggtgatccctcacgggcggccgaccgttccatcctctgccccgcgcaagaccgcc
gctgtgcctgttgccgcctccaaaccccgggccaatgccgtccgtccgctaactttcacg
agccttgttatcccgcgcgacaacacgcccatctcggacatctatgcacgctaccgcccg
caacggatcgagatcgcgggtgcgcaggaacatcccacgccgctcgtcgagagcatcgcc
atggcctcggttgccccgcccatgccctcaaacacgggcagtgatgacttgcgcttgccc
gcacggttgatcgaggagggacatctctccgaggcgcagctcgagaccatcatcatggcg
catgatgcccatgggcgtgatctgcccggtcggtttaccatcgatgacgaccagaccaag
ctgacgcgcgccgatgatgacccggatgcacgtgcctttcgccttggctatttcctcggc
gacggcaccggttgcggcaagggccgcgaatgcgcagggctcattctcgtgaactggctt
tccgggcgcaggaaggcgatctgggtctccaaatccgccacgctcatcgaggacgcgatc
cgcgactggaccgatctcggcggctcgcctgccgacattcagccactttccaaatggaaa
ccggatcagcccgtcccgatgggcgacggaatcctcttcgtcacctacgccacgctgcgg
tccgcgggcaaatgcggcaccacgcgactgagccagatcctcgactggatgggcgcagac
tttgaaggcgtcctcgcttttgatgaggcccatgccatgcagaatgcggcagggtccgag
cagggcaggggggtcaaaccctcccagcagggccttgcgggcctgcggctgcaactggca
gcaccccgcgctcgcgtcttctacatctcggccacgggcgccacgagcgtgcacaacctg
gcctatgccgcgcggttggggctctgggggcaggaccccgaataccccttcccgagccgc
gagggtttcgtttcagcgatggaagccggcggcgtggctgccatggaggtggtcgcgcgt
gatcttaagacgctcggcctctacacggcgcgcgccctcagctttgatggcgtggagtat
gacgtgctcgaacacgcgctcacttcggcccagatcgagatctacgacgcatacgcggct
tcttttcggacgatccaccacaatctcgaggccgcgctgacagcgaccggcgtcaacgac
gcctcgggagagaccaatgcctcggcagcacgcgcctcggccaagtcccgcttcgagagc
acgaagcagcgcttcttcaaccatctcctgatgggcatgaaggctccaagcatcatccgc
gccatcgaggacgatctggcggcgggcaaggcttgcgtcatccaggtggtctcgacgggc
gagagtctgctgaaacgccggcttgagacgatggaccccgaggatgaactcgtcgagggc
gcgctaacgccgcgcgattacgtactgggctacctcgaacaggccttcccgatccacgcg
caaaagctcgtggagattgacggcaacatggtcgcggaacctttacgggatgagaccggg
gcgctcgttgtctcgcgcgaggcgctcgccctgcgcgatgcggccatgatggagttgatg
acgctcgccccgatcccctcggcgctcgatcagatcctctgggcctttggcgacgaggcc
gtcgctgaagtcactgggcgatctatccgccctttgaaggccgaggacggtcatctcttc
atcgaaaagcgcgccgccagcagcaattcgtcggagacccaagccttcatggatggcgag
aaggatatcctgattttctccgatgcgggcggcacgggccggtcctatcacgcggcgcaa
acggcgaagaaccagaaacggcggcggcactatcttctggagcccggctggcgcgcggat
gcggccatccaggggttgggccgcacccatcgctcggctcaggtcagcgcgcccttcttc
cgcgtctgcacctcggatgtgcatggcgaaaaacgcttcacctcgactatagccaagcgc
ctcgaccagctaggggccttgaccaagggtcagcgcgagaccggctcgcaaggcatgttc
cgcgaggaggacaatctcgaaagcccgatcgcgcgggccgcactacgtgggtatttcgcc
gatcttgccgccgggcgcgctgaggcgatgagctacaagagcttcaccgactggacagcc
ctgcggctgatcgacaaggacggggtgctgctcgaggagttgccgccgatccagcggttt
ctgaaccgggttctggccctgcccatccacatgcagaacgcgctctttgccgagttcatg
cgccggattgccgatcagactgaacgggcgcgcgcggcaggcacgctcgatctcggcgtg
gaaaccctgcgcggcgaaaagatcgagcaggtctccacagaggatctctggacctgcccg
aaatccggcgccgtgacgcggatcatcgggctcgaggtgacggacccggtccatgtcttg
ggcgctgaagaggccatatcgcgcaatccggacaagctgccgatggtcaatcgcgcctcc
ggtcgcgcggcgctcatctcggcacgcccgatgcagatgtatgacgaagacatcgtcacg
ctgatgcgcaaggttgtgcggccaaacgggtcgagctacctggaggaggcgcggttcacg
tcttcggcctgggaagacatcgaaaggcccgagtttgcaaagctttgggatgccgaggct
gcatccctgccaaaaaccaccacaaccaagctctacctgctgaccgggctcttattgccg
atctggaaggacattccgaccaccaatgaacgcatctaccgggtcacgcctgacggggcg
acggcgatgatcgggcgcacgctgagcgaggaaggggcggcagcgctgcgcgcccgcttc
ctcgtgtccaacccgcaaacagcgcaggagatgctgaccgccgccctcggcaccaccgcg
cctgtcgatctgggccggggtctcaccctgacccgtcgccgtgtcgcaggcgagatgcgc
cttgagttgtgcggcgtggacaggggcatgattgatggcctcaaggcaatggggtgtttc
accgagatcattgccttccagctacgggtgttcctgccgcatggggacgggatcgacacg
ggaagcattctggcccggatcgtggggcaggaagccagcatgacgtcagaacaagccgcc
tga
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