Roseovarius indicus: RIdsm_05490
Help
Entry
RIdsm_05490 CDS
T06222
Symbol
lptB_16
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
rid
Roseovarius indicus
Pathway
rid02010
ABC transporters
rid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIdsm_05490 (lptB_16)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_05490 (lptB_16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rid02000
]
RIdsm_05490 (lptB_16)
Transporters [BR:
rid02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RIdsm_05490 (lptB_16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_22
AAA_23
ydhR
AAA_29
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
QEW29644
UniProt:
A0A5P3ALN8
LinkDB
All DBs
Position
pRIdsm_01:203510..205378
Genome browser
AA seq
622 aa
AA seq
DB search
MSGKPDTAAGLSRSPADAIAGALRSEGAVAILVIWVAVVIAFTVLNAYWVSVAVMMLVWC
YLCTAWNLIGGYVGQVSFGHGAFFGVGAYCTIYLATTYGISPWLGMVVGMALSVVLALAA
GYIPFRKGLSHLVFALLTLALAYALFYGVSGVRALGGTNGMFMPLDETGLAALRFNDLWP
FLLVIAVFNTVLLLVLQALLNSRHGFIWRATRDNEAAAAASGINLFRSKQLAFAISAAAT
SVAGGFYAQFVGFIDPHSVLGVHVIILILLFSVVGGTGTLLGPVVGTLVLFPLGEIMRVQ
LMSLGAGAHQLVYGAALVAVILLLPGGLIGQLRRALGGRWFSGFTLAVPHSVAAGPLPRR
HAADLEDGGKILTADGVGRDFGGVTALQSVDLEVRQGEILGLIGPNGAGKTTFFNLLGGS
FPPSRGRITLLGQRVDGLAPHECTQLGIARTFQITQTFASFTVAEAVFTAALPGRSFDEA
RSIAGRVLVRVGLEARRDVPCAELTLSERRRLEIARALATGPSLLLLDEVMAGLTPTEVT
SVITLIRGLRAEGITVVIIEHVMHAVMELCDRIVVLDAGAVIAEGLPSEVSRDPHVIEAY
LGKRAQQASAAAASDNADNGET
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaaacccgataccgcggccggcctcagtcgatccccggcggatgccatagca
ggcgcgctgcgcagcgaaggtgcagtcgccatcctggtcatctgggtggcggtggtgatc
gccttcaccgttctgaacgcctactgggtcagcgtcgcggtgatgatgctcgtgtggtgc
tacctctgcacggcctggaacctgatcggcggctatgtcggccaagtctcctttggccac
ggggctttcttcggtgtcggtgcctactgcaccatctaccttgcaaccacctatgggatc
agtccctggcttgggatggtcgtcggcatggccctgtcggtcgttctcgcgctggcggcg
ggttacattccgttccggaaaggtctcagccacctcgtctttgcgctcctgacgcttgcc
ctagcctatgcgcttttctatggagtgtcaggggtcagagcactcggtggcaccaacggc
atgttcatgccgcttgacgagaccggtcttgcggccctgcgctttaatgatctctggccc
tttctgctcgtcatcgcggtattcaacaccgtgctccttctcgtcctgcaggcgcttctg
aattcgcgccacggcttcatctggcgcgccacccgggacaacgaggccgcagcggcggcg
tcaggcatcaacctcttcaggtccaagcagctcgccttcgccatcagcgctgcggcgacc
tcggtggcgggcggcttctacgcgcagttcgtgggcttcatagacccgcattcggtgctg
ggggtacatgtaatcattctgatcctgctgttctcggttgtcggtggcaccggaacactt
ctggggccggtcgtgggcacccttgtgctcttccccctgggcgagatcatgcgcgtgcag
ttgatgtcgcttggggctggcgcgcaccagttggtctacggggccgcccttgtcgcggtg
attctgcttctgccgggcgggctgatcgggcagttgcgcagggcactgggcgggcgatgg
ttttccggcttcacccttgccgtgccgcattccgtcgctgccgggccgttgcctcggcgc
cacgccgccgaccttgaggatggcgggaaaattctcaccgccgatggcgtgggccgcgac
tttggcggcgtgacggcactgcagtcggtcgatctcgaagtccgtcagggcgaaatcctc
ggcctgatcggccccaacggcgccggcaagacgaccttcttcaacctgctcggcggttcc
tttccgccaagccgcggccggataaccctgctcgggcagcgcgtcgacgggctggccccg
cacgaatgcacccaactgggcatcgcgcgcaccttccagatcacgcagactttcgcgtcc
ttcacggtggccgaggcggtgttcactgccgcgcttcccggccgctccttcgacgaagcc
cgcagcatcgcaggtcgggtgcttgtccgcgtcgggctcgaggcgcgccgggatgtgccc
tgtgcagagctcacgctgtccgagcgtcgtcggctggaaattgcgcgtgcccttgcaacg
ggaccttctctgttgctgctcgacgaagtcatggcggggcttacaccgaccgaggtgaca
agcgtgatcacgctcatccgtggcctgcgcgcggaaggaatcaccgtggtgatcatcgag
cacgtgatgcatgcggtgatggagctttgcgaccggattgtggtgctcgatgcgggcgcg
gtgatagccgaggggctgccaagcgaggtcagtcgggatccccacgtgatcgaagcctat
ctcggcaagcgcgcgcagcaagcctctgccgccgcagcatccgacaacgccgacaacgga
gaaacctga
DBGET
integrated database retrieval system
