Roseovarius indicus: RIdsm_05509
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Entry
RIdsm_05509 CDS
T06222
Symbol
sucD_4
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K24012
acetate---CoA ligase (ADP-forming) [EC:
6.2.1.13
]
Organism
rid
Roseovarius indicus
Pathway
rid00010
Glycolysis / Gluconeogenesis
rid00620
Pyruvate metabolism
rid00640
Propanoate metabolism
rid01100
Metabolic pathways
rid01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RIdsm_05509 (sucD_4)
00620 Pyruvate metabolism
RIdsm_05509 (sucD_4)
00640 Propanoate metabolism
RIdsm_05509 (sucD_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rid01004
]
RIdsm_05509 (sucD_4)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.13 acetate---CoA ligase (ADP-forming)
RIdsm_05509 (sucD_4)
Lipid biosynthesis proteins [BR:
rid01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
RIdsm_05509 (sucD_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Succ_CoA_lig
CoA_binding_2
CoA_binding
Ligase_CoA_2
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QEW29663
UniProt:
A0A5P3ALQ2
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All DBs
Position
pRIdsm_01:225803..227218
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AA seq
471 aa
AA seq
DB search
MAEPNTNRMTTPRPTVGQALDGLFDPRTIAVVGASRTKGKLGQAVLALLKSNGYRGKIIP
VNPSGGEIEGLAAARSLEEIDGPIDVVVLATPVGVALDALETCTRLDVKVVVGVTSGFSE
AGEDGHNNEMRLRRIMQDAPFRLVGPNCEGVVRPASDLQLTFSPMFNGLRPGPVAMISQS
GALGGLMALRLGERGVGINAIVSSGNETDLTAADLLEYLGNDPQTRVVLCYVEELRDGRR
FAEAAQRLTRAGKHVIAVKGGRSRAGSRAVQSHTGAMAGDDRVISAVFRETGVIRARESV
AAVDAVTALAAGRRPAGNRVGIISVTGGLGVEMTDLAESAGFEVPVLAEATQTALSRYVP
FYGSVSNPVDLTGVVLANPTYVGRCLEAVAADPGVDIAIAIITFVPDQQFIEALAEAFDS
TGKPILIVWTGSARSNASGEALRERAVPVYDSPARAASGLSALAATTGEVA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccaaacacgaatcgaatgacgacaccccgccccacggttggccaagctctg
gacgggctgttcgacccgcgcaccatcgcggtcgtcggggcgtcccgcaccaagggcaag
ctcgggcaggccgtgctggccctgctgaagagcaacggctatcgcggcaagatcattccg
gtgaacccctcgggcggcgaaatcgaggggcttgcggcagcacgcagcctggaggagatc
gacggcccgatcgacgtggtcgttctggcaacccctgtcggcgtcgctctcgatgcgctg
gaaacctgtacccggctcgatgtgaaagtcgtggtcggggtgacctccggcttttcggaa
gccggggaagacggccacaacaacgagatgcggctgcgccggatcatgcaggacgcgccc
tttcgcctggtcgggccgaactgcgaaggcgtggtgcgccccgcgtcggatctgcaattg
accttcagccccatgttcaacggtctcaggcccggccccgtggccatgatttcccagtcc
ggcgcgctaggcggccttatggcgttgcgtctgggcgaacgcggcgtggggatcaatgcc
atcgtctccagcggcaacgaaacggatctgaccgccgcggatctgctcgaatatctcggc
aacgatccgcagacccgcgtggttctgtgctacgtcgaggaactgcgcgacgggcgccgc
tttgccgaggcggcccaacgactcacaagagccggaaagcacgtcattgcggtcaagggc
ggacgaagccgcgccggatcgcgcgctgtccaatcgcataccggcgcgatggccggagac
gaccgggtgatcagtgcggtcttccgcgaaaccggggttatccgcgcccgggaatccgtg
gctgccgtcgatgccgtcacggccctcgccgcaggcaggcggcctgccggcaaccgggtc
ggaatcatctctgtcaccggcgggctcggcgtcgagatgaccgacctggccgaaagcgcc
ggcttcgaggttccggtcctggccgaagcgacgcaaaccgcgctgtcgcgttatgtgccg
ttctacggctcggtgtcgaatccggtcgatctgaccggcgtcgttctggcgaatcccacc
tatgtgggccgttgcctggaggccgtagcggccgatccgggcgtggatatcgccatcgca
attatcacatttgtgccggatcaacagttcatcgaggctttggccgaggcgttcgacagc
accggcaagccgatcctgattgtctggacaggctcggcgcgcagcaatgcctcgggcgag
gcgctgcgcgaacgggctgtcccggtttatgattcgcccgcgcgggcggcctcgggcctt
tcggcgctggcggctacgacaggagaagtggcatga
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