Roseovarius indicus: RIdsm_05579
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Entry
RIdsm_05579 CDS
T06222
Symbol
lcfB_16
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rid
Roseovarius indicus
Pathway
rid00061
Fatty acid biosynthesis
rid00071
Fatty acid degradation
rid01100
Metabolic pathways
rid01212
Fatty acid metabolism
rid02024
Quorum sensing
rid04146
Peroxisome
Module
rid_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RIdsm_05579 (lcfB_16)
00071 Fatty acid degradation
RIdsm_05579 (lcfB_16)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIdsm_05579 (lcfB_16)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIdsm_05579 (lcfB_16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rid01004
]
RIdsm_05579 (lcfB_16)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rid04147
]
RIdsm_05579 (lcfB_16)
Enzymes [BR:
rid01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RIdsm_05579 (lcfB_16)
Lipid biosynthesis proteins [BR:
rid01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RIdsm_05579 (lcfB_16)
Exosome [BR:
rid04147
]
Exosomal proteins
Exosomal proteins of breast milk
RIdsm_05579 (lcfB_16)
Exosomal proteins of breast cancer cells
RIdsm_05579 (lcfB_16)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QEW29733
UniProt:
A0A0T5P7X9
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All DBs
Position
pRIdsm_01:294793..296334
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AA seq
513 aa
AA seq
DB search
MTATSLTYCLETAATLLRDRPFLINDDGETTFGEFDALSGRLANVLLAHGVARGDAVGLY
LPSCPFLSAGYFACQKIGAIAAPISSMNRAQELRPLLERTQMRVMLVDTDTAAEAVCACK
DVAHKVTILASGDAVAGTVPLDLAPASVQCPPLPLRPEDPAALFFTSGTTGAPKGAVQTQ
RSITTTLRDMAVHAGFSWDREVFLCALPVFNNFGATVMVNGAVYNGARVVMLERWDTQKV
LDAITRHRVTYMAGAPTMFLYMLREFNPDRHDLSSMRLAVAAGAPVSPEILAEFEKTTGV
PILELYGATEVSGGATAQPLVGVRKRGSAGVPLGNARIAIVDEDGAPVPTGETGEVRISG
EIVGAGYWDDEETTVASFSEDGWLSGDIGYVDEDGYLFIVDRKKDVIIAGGYNIYPIEVE
DLLFSHPDVGVCAVIGVPDDVKGEIPAAVLIPRADRSLDPAALIAFCRENLAAYKVPRRW
FTVAEMPHGPTGKILKRTLRVWLGEGRLTEVTP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacggctacatcgctgacatattgtctggaaacggcggctaccctgcttcgcgatcga
ccctttctgatcaacgacgatggcgagaccacgttcggagaattcgacgcgctttccggt
cggctggccaatgtattgttggcgcatggcgtcgcacggggcgacgccgtagggctctac
ctgccgagttgtccgtttctcagcgcgggctatttcgcctgccagaagatcggcgccatc
gccgcgccgatctcaagcatgaatcgcgcgcaagagcttcgcccgcttctggagcggacg
cagatgcgcgtgatgttggtggatacggacacagcagccgaggccgtatgtgcctgcaag
gacgttgcgcacaaggtgacgatcctcgccagcggagatgcggttgccggcaccgttccg
ctcgacctcgctccagccagcgtgcagtgcccaccactgccgctgcgcccggaggatccg
gcggcgctcttcttcacctctgggaccaccggcgcgcccaagggggcggtgcagacccag
cgcagcatcaccacgacgctgcgggacatggcggttcacgccggtttcagttgggaccga
gaggtgttcctttgtgcgctgcccgtgttcaacaatttcggtgccacggtcatggtgaac
ggcgctgtctacaatggcgcccgcgttgtcatgctggagcgctgggatacccaaaaagtg
ctcgacgcgatcactcggcaccgggtgacctatatggccggcgcgccgacgatgttcctg
tacatgctgcgtgagttcaatcccgatcggcacgacctgtcctcaatgcggcttgcggtc
gctgccggggccccggtttcaccggagattctggcggagttcgaaaagacgaccggggtg
ccgatacttgagctctacggggcgaccgaggtttccggcggagccaccgcccagccgctt
gtcggcgtgcgcaagcgcggctctgccggcgttccactcggcaatgcgcgcattgcgatc
gtggacgaggacggtgcgccggtccccaccggcgaaaccggcgaggtgcgtatctcaggc
gaaattgtcggcgccggctactgggacgacgaagagacgaccgtggccagcttttccgaa
gacggctggctcagtggcgacatcggctacgtcgacgaggacggctatctgttcatcgtc
gaccgcaagaaggacgtgatcatcgccggcggctacaacatctatcccattgaggtggaa
gatctattgttcagccatccggatgtcggcgtatgtgcggtgatcggcgtgcccgacgac
gtgaagggcgaaatccctgctgccgttctcattccccgcgccgaccggtcgcttgacccc
gccgcgctgatcgctttctgccgcgagaaccttgcagcttacaaggtcccgcgccgctgg
ttcacggtcgcagaaatgccccatggccccaccggcaaaattctgaaacgcacgctgcgc
gtctggcttggcgaagggcgcctgacggaggtaacgccatga
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