Roseovarius indicus: RIdsm_05613
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Entry
RIdsm_05613 CDS
T06222
Name
(GenBank) putative RecB family nuclease, family
Organism
rid
Roseovarius indicus
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H_2
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
NAT10_TcmA_helicase
nSTAND3
UvrD_C_2
IstB_IS21
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEW29767
UniProt:
A0A0T5P2F0
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Position
pRIdsm_01:331754..335047
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AA seq
1097 aa
AA seq
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MRDLDGRIFLSATDLMRFTGCAHATTLDLANMRGTGPAPGDDTEDAALLQKQGDAHEAAH
LAHLKEAGRTVMEIERGKLGENAEATRAALAAGPDVVFQGAFLSGNWGGWSDFLERVETP
SALGPFSYEVADTKLKRRADPKHVLQLVLYSDLLAEIQGVVPEFAHVELGDGTRATLRLA
DYAAYARMARERLEAFVADPQPTRPVPCADCGLCRWAEHCNSVWHAEDSLFNVANISRGQ
VKKLEAAGVDTLEALSTLDHPVRGMAENTQARLVTQARLQQARKTGEPDFELRAPEPSKG
FDLLPEPQPGDLFYDIEGDPHYEGGLEYLHGIWFDEQFKAFWAHDHDAEARALSDLLAFF
RTRIAAYPNARIYHYAPYEITALKRLTTKYGIGEAFLDRLLRERRFVDLFAVVRGGLIGS
EPNYSIKSMEAFYDRKRDGEVKTAGGSVVAYERWRETQDQQILDEIEDYNRVDCISTEEL
RDWLVGIRPVGPWPTLAPDAGDKEVEEDADTQALRNLLGASCLPAARQDLLFNLGVFHSR
EVKPAQWAVFDSATKDEDDLLDDLDALGGLEALGPVEPVKRSFARRYTYPEQETKLRSGK
KATVPVFDSPPTTVGIESMDRRAREITVKAGPGKADLLAGRLTLHPDWPIQTGVIAAALR
DVIADQCGARRYTAVDDLLSRAAPRLRSGATGDLLGGADPVAGTIAVVNDMDGTVLPIQG
PPGTGKTYVSARAILSLVRQGFRVGVASNSHEAIRNVLMGCLLALEDDDPDITLENAELA
HKVGGGEDGYPDGFFGITRAQSNDDPALTDAHVVGGTAWFFSRDENVQAFDWLFVDEAGQ
VGLANMAAMGRAARNIVLVGDPRQLPQVIQGAHPEPANLSCLDWMLGEHATVPADRGIFL
PTSRRMHPDVCRFVSEQVYEGRLSSHPDTANQGVTGTALPEAGAFWVPVLHEGNAQIAQE
EVAAIEKIVTELLGGSWTEKDGSTRSMRETDIIVVAPYNAQVNALRDALPLGVRVGTVDK
FQGQEAPVCLVSMTASSAEETSRGMEFLFSLNRINVAVSRAKGLALAFGAPRLREAKCNT
VEQMRLVNTLCALPLIK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagggatctcgacggtcgcatattcttgtccgcaacggatctcatgcgcttcacaggc
tgcgcacatgcgaccacccttgatctggcaaatatgcgcggaacgggcccggcgccggga
gacgacaccgaggacgcagcactgttgcaaaagcagggcgatgcgcatgaggcggcgcac
cttgcacatctcaaggaggccgggcgcacggtcatggaaatcgagcgcggcaaacttggc
gaaaacgccgaagccacgcgcgcggcgctcgccgctggtccggatgtggtgtttcagggc
gcgtttctgtcggggaactggggcggctggtccgacttcctggagcgtgttgagaccccc
tcagcgctcggaccgttcagctacgaggtggccgacaccaaactgaaacgtcgggccgat
cccaaacatgtgcttcagctggttctgtattccgatctgttggcggaaattcagggggtg
gtgcccgagtttgcgcatgtcgaattgggcgacggcacccgcgcgacgctgcgcctggca
gactacgcggcctatgcacggatggcgcgcgaacggctggaagctttcgtcgccgatccg
cagccgacacgcccggtgccatgtgctgattgcggtctgtgccgctgggccgaacattgc
aacagcgtctggcacgccgaagacagcttgttcaatgtcgccaacatcagtcgtggtcag
gtaaagaaactggaagccgcgggcgttgacacattggaggctctctcgacgctggatcac
ccagtgcgcggaatggccgaaaacacgcaggcccgtttggtcactcaggcccgcctgcag
caagcccgcaaaaccggggaacccgatttcgaactacgggcacccgagcccagcaagggc
ttcgacctcttgccggaaccacagccgggcgacctgttctatgacattgaaggcgatccg
cactacgagggcggcctagaatatctgcatggcatctggttcgacgaacagttcaaggcg
ttctgggcccatgaccacgatgccgaagcgcgggcattgtccgacttgctggcgttcttt
cgtacgcggattgcggcgtatccaaatgcgcgcatctatcactacgcgccctacgagatc
acagcgctgaaacgcctgaccaccaaatatgggatcggagaggcctttctcgaccgtttg
ttgagggaacgccgctttgtggatctgttcgccgtcgtgcgcggcgggctgatcggatcg
gaaccgaactattccatcaaatcgatggaggctttctacgaccgcaagcgcgacggtgag
gtcaagacagcgggtggctcggtcgtggcctatgagcgctggcgcgaaacgcaggaccag
cagattctggacgagatcgaggattacaaccgcgtcgactgtatctcgactgaggaactg
cgcgactggctggttggcatccggcctgtcggcccttggccgacactcgccccggatgca
ggcgataaagaagtcgaagaggacgccgacacgcaagctctgcgcaacctgctgggagca
tcatgcttgcccgcggcgcggcaggatctgctgttcaacctcggcgtctttcacagccgc
gaggtaaagcccgcgcaatgggccgtattcgatagcgctacgaaggacgaagatgatctg
ctcgatgatctcgatgcacttggcgggcttgaagctttgggtcctgtcgaacccgtcaag
cgatccttcgcgcgccgatacacctatcctgaacaggaaacgaaactgcggagcggtaag
aaggcgacggttccggtgttcgacagtcccccgacaacggtcgggatcgagtccatggat
cggcgggcacgtgagatcacggtcaaagcaggtccgggcaaggccgacctactggcgggc
cggctgacgctgcatccggactggccgatccagacgggcgtaattgccgctgctttgcgt
gacgtgatcgccgatcagtgtggcgcgcgccggtatacggccgtagatgacctgctgtcg
cgcgctgcaccgcgtctgcgttctggtgcaacgggtgatcttctgggcggggcagatccc
gtagcaggcactattgccgtggtgaatgacatggatggaacggtcctgccgatccaggga
ccacccggtactggtaagacctacgtgagcgcccgcgcgatcctgtcccttgtccgccaa
gggttccgagtcggagtcgcttcgaacagtcacgaggcgatccgcaatgttctgatgggc
tgtcttcttgccctcgaggatgacgatcccgacatcacgttggaaaacgccgaactggcg
cacaaggtcggcggcggtgaggatgggtatcccgatggatttttcgggatcacccgcgcg
cagtcaaacgacgaccctgcgctgaccgatgcccatgtcgtgggcggcaccgcgtggttc
ttctcgcgcgacgaaaatgtgcaggcgtttgattggcttttcgtcgacgaggccggccag
gttggactcgcaaacatggccgccatgggtcgtgccgcgcgaaacatcgtccttgtgggc
gacccacgccagttgccgcaggtcatccagggggcacatcccgagcctgcgaacctgtcg
tgcctggactggatgttgggggagcatgcgacggttccagccgaccggggcatcttcctt
cccacatcccggcgaatgcaccctgacgtctgccggtttgtctcggagcaggtgtatgaa
ggccgactgagcagtcatcctgatacggccaatcagggcgtgacaggcactgcgctcccc
gaagccggagctttctgggtgcctgtcctgcacgagggaaatgcccagatcgcacaggaa
gaagtcgcggcaatcgaaaaaatcgtcactgagttacttggtggaagctggacggagaag
gacggcagcacgcggtcaatgcgcgagacggacatcatcgttgtcgccccgtataacgca
caggtaaacgctctcagggatgcccttccattgggtgtccgcgttggaaccgtggacaag
tttcagggacaagaagcaccggtttgcctggtttccatgaccgcatcttccgctgaagaa
acctcgcgcggaatggagtttctgttttcgctgaaccgcatcaatgtcgcggtgtcacgc
gccaagggactcgcattggcatttggagccccgcggttgcgtgaggcgaagtgtaacaca
gttgagcaaatgcggctggtaaatacgctgtgtgctctgccattgatcaaatag
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