Roseovarius indicus: RIdsm_05716
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Entry
RIdsm_05716 CDS
T06222
Symbol
hmrR_4
Name
(GenBank) Copper export regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_05716 (hmrR_4)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rid01504
]
RIdsm_05716 (hmrR_4)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RIdsm_05716 (hmrR_4)
Antimicrobial resistance genes [BR:
rid01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
RIdsm_05716 (hmrR_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
Motif
Other DBs
NCBI-ProteinID:
QEW29870
UniProt:
A0A0T5NWU9
LinkDB
All DBs
Position
pRIdsm_01:complement(429794..430222)
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AA seq
142 aa
AA seq
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MNIGNVSEMSGLPAKTIRYYEDIGLVQPSRRENGYRDFAVQDLHKLAFLGRARSLGFSIE
ECRTLLSLYEDRERSSADVKAIAQSHLARVDQKIEELQALSATLRNLVVRCHGDDRPDCP
IMDDLTGSDLAETQKYPAGTTY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggaaatgtctcggagatgagcggtttgcccgcaaaaacaatccggtattac
gaggatatcggactcgtgcaaccgtcgcggcgtgaaaacgggtaccgcgatttcgctgtt
caggatctgcacaagctggcgtttcttggccgggcgcggtcgttgggtttcagcatcgag
gaatgtcgcacgctgttgtcattatacgaggatcgcgaacggtccagcgccgacgtcaag
gcgatcgcccaaagtcacctcgcgcgggtggaccaaaaaatcgaggagttgcaggcgctg
agcgcgacgcttcgcaatcttgtcgttcgctgccatggcgatgatcgtcctgactgcccg
ataatggatgacctgacgggttccgacctcgcggagacgcaaaaatatcccgctggaaca
acctactga
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