Roseovarius indicus: RIdsm_05843
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Entry
RIdsm_05843 CDS
T06222
Symbol
erfK_6
Name
(GenBank) putative L,D-transpeptidase ErfK/SrfK precursor
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rid01002
]
RIdsm_05843 (erfK_6)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
RIdsm_05843 (erfK_6)
Peptidases and inhibitors [BR:
rid01002
]
Cysteine peptidases
Family C82
RIdsm_05843 (erfK_6)
Peptidoglycan biosynthesis and degradation proteins [BR:
rid01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RIdsm_05843 (erfK_6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
QEW29997
UniProt:
A0A0T5P139
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All DBs
Position
pRIdsm_02:106064..106639
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AA seq
191 aa
AA seq
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MEDKTPRAIRRRGFLFFSVGGLVALAAPSVLRAQESDSVRRNISSFRLHRWQDHFDALGK
GILLSDTNTRVLQHWTADGEMRIYPTSVPKSDELTRRGYSEIVYKDEAPDWVPTPSMRER
DPSLPDYVAPGPKNPLGVRAMHLTWQYYRIHGTGDTRKIGRRSSSGCIGLYNEHIIEVFD
RTPIGTQVKLI
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagacccccagggcaataagacgccgaggctttctattcttttcggttgga
gggctcgttgctcttgcggcaccatcggtgttgcgtgcccaagagtcggactcggttcgc
cggaatatttcgtcattccggttgcatcgctggcaggatcactttgacgcgctcggcaaa
ggaattctgctttccgataccaacaccagagttcttcagcactggaccgcggatggggag
atgcgcatctaccccacatcggttcctaagagcgacgaactcacgcggcgtggctatagc
gagatcgtctacaaggatgaagctcccgactgggttcccaccccatcaatgcgcgaacgc
gatccgtccctaccagactatgtcgcccccggccccaaaaacccgcttggcgtccgtgcc
atgcacttgacttggcaatattaccggattcacggaaccggcgacacccgcaagatcggc
cgtagatcttccagcggatgcatcggtctttacaatgaacatatcatcgaagtgttcgac
aggactccaatcggcacccaagtcaaacttatctga
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