Roseovarius indicus: RIdsm_05896
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Entry
RIdsm_05896 CDS
T06222
Symbol
cysL_5
Name
(GenBank) CysJI operon transcriptional activator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rid
Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:
rid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rid03000
]
RIdsm_05896 (cysL_5)
Transcription factors [BR:
rid03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIdsm_05896 (cysL_5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_30
HTH_20
HTH_24
BLACT_WH
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QEW30050
UniProt:
A0A5P3AMX8
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Position
pRIdsm_03:32541..33404
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AA seq
287 aa
AA seq
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MLNLSLVRSFVGLVEAGSFHGAATRLKIAQPTISQHLQKLEEDLGVPLIERSHAGSRPTR
HGERFLPHARHLLKSAARAETIARDDSLIVGCSGNIASYYMAKAFKGFLDAEDWRGRWEI
TSAPNPRIAEMLLSREIDIAAMEWPLSHPDVAAERWRSAEMIVILPTDHPWAGRREITVE
EFLTLEMIGGESGSGTGTLLRDVLGDRAGELRTRANVGSTEAVKQAVMSGLGASIILAEA
VTHEIDTGALIGISIKGMAMKKTFFTARLKTIRDDEIATKLSRFLTG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacctgagccttgtgcggagctttgtcggtcttgtcgaagcgggtagtttccat
ggcgctgcgacccgcttgaagatcgcacaaccgacaatttcccagcatttgcaaaagctt
gaagaggatttaggcgttccactgatcgagcgtagtcatgctggcagccgtccgacacgg
catggcgaacgcttcctgcctcatgcgcgccatctgttgaaatctgctgcacgcgccgag
accatcgcgcgcgacgacagtctgatcgttgggtgcagtggcaatatcgccagctactat
atggccaaggcgttcaaagggtttctggacgcggaggactggcgaggccggtgggaaatc
acctcggcacccaatccccgcatcgccgagatgctactgagccgggagatcgacattgcg
gcaatggaatggcccctttcacacccggatgtcgcggcagagcggtggcgcagcgcggag
atgatcgtgatcctgcccaccgaccatccttgggcgggccgccgcgagatcaccgtcgag
gagttcctcacacttgaaatgatcggcggggaaagtggatccggcaccggcacgctcctg
cgcgatgtgttgggcgacagggccggcgaactgcgcacgcgcgcgaatgtcggatcgacc
gaagccgtcaaacaggctgtcatgtccggcttgggtgcttctatcattctcgccgaagct
gtaacccatgaaattgataccggcgcactgatcggtatttccatcaaaggaatggcgatg
aagaagacattcttcacagcccgcctgaagacgatcagagacgacgaaatcgcaacaaag
ctgtcccgctttctaactggctag
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