Rhizophagus irregularis: OCT59_000079
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Entry
OCT59_000079 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_000079
Enzymes [BR:
rie01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
OCT59_000079
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
OCT59_000079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
zf-C3HC4_3
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-RING_2
SAP30_Sin3_bdg
Motif
Other DBs
NCBI-GeneID:
36882826
NCBI-ProteinID:
XP_025170772
LinkDB
All DBs
Position
1:469809..471382
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AA seq
400 aa
AA seq
DB search
MSYFQDYVRSPGTTYHEPLTHSIPKLKPLNVASCCSSCGITFRLFRPKYNCYNCGNVTCG
RCSSNGTEIPKFGYFEPVRTCDLCYSYLKVMKMNRSQLARLPTKTLREYISAYNLPCHNI
IEKDDLIDVIMAHIPLEERYEVYYRDHYPTFHVAAASDTQPSARTETQNNTGYTRSHTVP
HSQSRSQPHPQSRSHPRSQPQPQPQSQPQPQPQFQPQPQPQTQPQFQPQPQPQPQPQPQP
QPRSRPQPQSQPRSQPQPQQPLPQRQQNHKQSQNPSHTAPISLQTIIRDKVDVSQLSVKT
IKGILKENCIDYSKMVEKYELIERMEILIKWAKHEMSSKAGEISDDGLCRICCDAQSNCL
FMDCGHMCTCLDCGKKLEETKNECPICRETIIKIIRVFRA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattttcaagattacgttcgaagccctggaacaacttaccatgaacctctaact
cactccatcccgaaacttaagccactaaacgtagcttcttgctgttcttcttgtggtatc
acatttcgcttgttccgtccaaaatataactgttataattgtggtaatgtaacttgcgga
cgttgttctagtaatggaactgaaataccaaaatttggttatttcgaacccgtgcgtact
tgtgatctgtgttatagttatttgaaagtaatgaaaatgaatcgatcacaacttgccaga
ttaccaaccaaaacgctgcgagaatatatttcggcatataatctcccatgtcataatatt
attgaaaaagatgatttaattgatgttatcatggcacatataccattggaagaacgttat
gaagtttattatcgagatcattatccaacatttcatgtagctgcagcgtctgacactcaa
ccaagtgctcgtaccgaaactcaaaacaatactggttatacaagatctcatacagtacct
cattctcaatctcgatctcaacctcatcctcaatctcgatcccatcctcgatcccaacct
caacctcaacctcaatctcaacctcaacctcaaccccaatttcaacctcaacctcaacct
caaactcaaccccaatttcaacctcaacctcaacctcaacctcaacctcaacctcaacct
cagcctcgatctcgacctcaacctcaatctcaacctcgatctcaacctcaaccccaacaa
cctttaccacaacgtcaacaaaatcataaacaatcacaaaatccttctcatacagcccca
atctcactccaaactattattagagataaagtggatgtatcccaattatctgttaagact
attaaaggaattctcaaagaaaattgtattgattactccaaaatggttgaaaaatatgag
ttaattgaacgcatggaaattttgattaagtgggcaaagcatgagatgtcaagtaaagca
ggtgaaatttctgatgatggattatgtagaatttgttgtgatgcacaatcaaactgttta
tttatggattgtggacatatgtgcacttgcttggattgtggaaagaaactggaggaaact
aaaaatgaatgtccaatttgtagagagacaatcatcaaaataatccgagtttttagggca
taa
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