Rhizophagus irregularis: OCT59_000622
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Entry
OCT59_000622 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rie03029
]
OCT59_000622
Enzymes [BR:
rie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OCT59_000622
Mitochondrial biogenesis [BR:
rie03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
OCT59_000622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
Motif
Other DBs
NCBI-GeneID:
36872275
NCBI-ProteinID:
XP_025167489
LinkDB
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Position
1:3043706..3048705
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AA seq
1368 aa
AA seq
DB search
MITFIRNTKSKCIPRPNIHINLRVYYLISLKRNKSNKRFETFRLHFGNDLTKTISELSPA
QTWPFAIHNYSTTAEHAMSTVSSEISYHSPEPLSINNPLVILPQPRYTPRETGKILFTEH
LAVLRACLKIGEVERARHILTNLYKNSSDTKKHLDIKLHNEFIESYLETKPVPRINEALQ
WFDKLNYYGLTPDLATFAILIRGYLRLDLDFLGSSMLNILVKEIEECGYSFEQLIESNLL
SDKETEKVLYLLRADTDSNKTSKKLMEKIENVIEKQTPVMINELNVDEPISTKSFGVRLM
KSALSAIKERDLGSVKRQIKLEENALLAATERWKHGNERKDKFVNLQKNVLKKSMWSWHE
KLVPLIQEELKRCKNKDTLLTDRERASYGPFLQLLSAEKLSAITILELLRQNGGGGIGEG
VKTTRAVLSIGKSVENEYNSEQLKKRRNRFAFNKDLSVHELFASGKLFNMTIRRAAAKFE
SKDMQTSWNPEWPIAVRAKVGSILASMLLECATIPTTTINEEKNEKISMEAPAFYHSYIQ
HKGKRTGIIKFNPQLIQYLSKEPVRDSIHPQMLPMLVHPRPWLTYNSGGYLTSPTYAMRS
RDCPEQLAYLQKASEEGHLDRVFAGLDVLGSTCWTINKKIYKVVLEAWNKGEALGNIPPA
EIDLKMPDKPENFETEMSVKVKWFKDCKDIARKICNNHSERCTANYKVDIAGAFLNENMY
FPHSLDFRGRAYPIPPLFNHLGNDLCRGLLLFKDSKPLRKNGLTWLKIQIANLAGNDKVS
FEDRIKFTEDHLEDIKDSAKNPLDGRGWWIKAEDPWQCLAACFELQDALESPDPEKYLSQ
IPIHQDGTCNGLQHYAALGGDLEGAKQVDLYPSDKPSDIYTSVAARVNEMIAKDLAAYSE
PLESLEDKKQNNLYPFNIYSDMDAKINVKDLALILHGKISRKIVKQPVMTSVYGVTFIGA
RLQIESRLKERQDIPQEKIRDLSLYITRLVFECLGEMFYGARAIQDWLVECAKRISKSVP
AEVVLDQNSSEYRDDENFINHNLESLQYNENGNKKNTINDSEKELCESKRNNHDNLINKK
RPIAKIPPSKPGQNQMTTVVWTTPLDLPIVQPYRKLSKRAVKTNLQTINISDPNHPSPVD
STKQRQAFPPNFIHSLDATHMLMTALACNEKNLTFASVHDSFWTHACDVDVMNKIIRDQF
IQLHEQPIMENLRNEFIERYKGYIIPVKILREDLEKLKLQKMEETEKNSITITDNGYEPT
LSLDDLYKIIPNSQKNKDSKLREFTNTLSANNAIDLDNEVAKSLTDITNINNISDDLFDE
DHDIDEEAETNKKKKKYIHIWVDLTFPKLPEKGEFKLSSIMESQYFFD
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgataacatttataagaaatactaagtcaaaatgtattccgcgaccgaatattcatatt
aatttaagagtttattatttgatatcgttaaaaaggaataaaagtaataaaaggtttgaa
acctttagattacatttcggaaatgacctcaccaagactattagtgaactttcaccagcc
cagacttggcccttcgcaatacataattattcaacgacagcagaacatgctatgtccact
gtttcttctgaaataagctatcattccccagaaccgttaagcataaataacccattagta
atccttcctcaacctcgttatacacccagagaaacgggaaaaatactctttacagaacat
ctcgctgttttacgagcgtgcttaaaaataggagaagtagaacgtgcaaggcatatttta
accaatttatataaaaattcaagtgatacgaaaaaacatttagacataaagctacataat
gagtttattgaatcttatttagaaacaaaacctgtgcctaggatcaatgaagccttacaa
tggtttgataaattgaattattatgggctaactcctgatttagcgacttttgctatttta
ataagaggttatttgagattggatttagattttctcggatcttcgatgttaaatattcta
gtaaaagaaattgaagaatgtggttattcgtttgaacaattaattgaaagtaatttatta
tctgacaaagaaacagaaaaagtattatatttattacgagcagatacagattccaacaaa
acatcaaaaaagcttatggaaaaaattgagaatgttattgaaaaacaaacacccgttatg
ataaatgagttgaacgtggatgagccaatttctacaaagtcgtttggagtaaggttgatg
aaaagtgctctttcggctatcaaggaaagagatctaggttcagttaaacgtcaaatcaaa
ttagaagagaatgcattactagctgctacggagcgttggaagcatggaaatgaacgaaaa
gataaatttgttaatttgcaaaagaatgttttgaaaaaatcaatgtggtcgtggcacgaa
aagttagttcctctaattcaagaggaattgaagagatgtaaaaacaaagataccttatta
actgatagagaacgcgcaagttacggaccatttttgcaattattaagcgctgaaaaactt
tcggctattacaatattagaattattgcgtcaaaatggcggaggaggaattggtgaagga
gtgaaaactacacgtgctgtgctttcgattggaaaatcggttgagaatgagtataattca
gaacaattgaagaagagacgaaatcgttttgcgttcaacaaagatttaagcgttcatgaa
ctgtttgcttctggaaaacttttcaatatgacgattcggcgagcagcagccaaatttgag
tcaaaagatatgcaaacaagttggaaccccgaatggccaatagccgtcagagctaaggtt
ggttctatcttagcttccatgttactagaatgtgcaactataccaactactactattaat
gaagagaaaaacgagaaaatttctatggaagcacccgccttttatcattcgtatattcaa
cataaagggaaaaggacgggaattattaagtttaatccacaattaattcaatatttgtca
aaggaacctgtcagagatagtatacatccacaaatgttaccaatgttggttcacccaaga
ccttggttaacttataatagcggtggatatcttacatctccaacatatgctatgagatca
agagattgtcccgaacaattggcttatctgcaaaaagcatctgaagaaggacatttggac
cgtgttttcgcaggattggatgttctaggatccacttgttggacaattaataagaaaata
tacaaagtagtgctagaagcttggaataaaggagaggctttaggcaatataccaccagct
gaaatagacttaaaaatgcccgataaacctgagaattttgaaactgaaatgtctgtaaaa
gttaagtggtttaaagattgtaaagatattgctcgtaaaatttgtaataatcattctgaa
aggtgtacagcaaattataaagtcgatattgctggtgcttttttaaacgaaaatatgtac
tttcctcacagtcttgatttccgaggtcgtgcataccctataccacctctgtttaatcac
ttaggaaatgatttgtgtcgaggtctattactgtttaaagactccaaaccattgcgtaaa
aatgggttgacttggcttaagattcaaattgccaatctagctgggaatgataaagtttcc
tttgaagatcgtataaaatttactgaagaccacttggaagatataaaagattccgctaaa
aaccctctcgatggcagaggctggtggataaaagccgaagatccttggcaatgtttggct
gcgtgttttgaactacaagatgcattagagtctccagatcccgaaaaatacctctcacaa
attccaatacatcaagatggcacatgtaatggattacaacattatgcggcacttggtggt
gatttggaaggagcaaaacaggtcgatttatatccttcagataaaccatctgatatatat
actagcgtagctgcgagagtaaatgaaatgatagcaaaagacttagctgcatattctgag
ccgttagaatctctggaagataaaaaacagaacaatttatatccttttaatatatatagt
gatatggatgcgaaaataaatgtaaaagatttagcattaattttgcatggcaagatttct
cgtaaaattgtcaaacaacctgtgatgacaagtgtttatggtgtaacttttattggagct
aggttacaaatagaatcacgtctcaaagagagacaagatattcctcaggagaaaattaga
gatttatcattgtatattactagacttgtatttgaatgtcttggagaaatgttttatggt
gctagggctatccaggactggcttgtcgaatgtgctaagagaatttcaaagagtgtaccg
gcagaagttgtgttagatcaaaattcttccgaatatagagatgatgaaaatttcattaat
cataatctagaaagtttacaatacaatgaaaacggtaataaaaagaatactataaatgac
agtgaaaaagagttatgtgagagtaaaaggaacaaccacgacaatttgattaacaaaaaa
agacctatagctaaaattccacctagtaagccaggtcaaaatcaaatgacaactgtcgtt
tggactactccattagacttgccaattgtgcaaccttatcgtaaattaagcaagagagct
gtcaaaactaatcttcaaacaattaatatttcagatccgaatcatcctagtccagtggac
tctactaaacaacgacaagcatttccacccaattttattcattctctcgatgcaactcac
atgttaatgactgcactagcttgtaacgaaaaaaatttaacttttgcttctgtgcatgat
agtttttggactcatgcttgtgatgtggatgttatgaataaaataatacgtgatcaattc
atccaacttcatgaacagcctatcatggaaaatctacgaaatgaatttattgagcgttat
aaaggatatataattcccgttaaaatattaagagaggatcttgaaaaattaaaattgcaa
aagatggaagagacagaaaagaattcgataacaataacagataatggatacgaaccaacc
cttagcttagatgatttatataagataataccaaattctcaaaagaacaaggattcaaaa
ctcagagaatttacaaacactttaagtgctaataatgcaattgatttggacaatgaagta
gcaaagtcattgactgacataacaaacattaataatatatcagatgatttattcgatgag
gatcatgatatagatgaggaagcagaaacaaataagaaaaagaaaaaatatattcacatt
tgggtggatttaacttttccaaaattgccagaaaaaggtgaatttaaattatcctcaatt
atggaaagtcaatatttctttgattaa
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