Rhizophagus irregularis: OCT59_001869
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Entry
OCT59_001869 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
rie Rhizophagus irregularis
Pathway
rie03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
OCT59_001869
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36871134
NCBI-ProteinID:
XP_025170406
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Position
10:1651607..1656047
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AA seq
1050 aa
AA seq
DB search
MDRSNLNYNQVHHDQLQYRNLPGPTAFPGRPPVIPGQPGQPGQSGQPGQPGQQSSFPVQT
YQQQQTVYNPQHSQQMPQQNTQQMLFLQPQQPTAAVYPAQTIYQPQQQPPYILQPTVPQT
RTEERPNNYVNLHPTLINTSNAANTAPNPTTTIAGGINRPAGRKQFTNGVNVNERRTNAN
SSIINKPHVATSSASTNQRQKVVPAEPGSWQIPPAAQQQLSAVQQRQSQQIETLELRIAE
NVYDTEAWLSLLDEVKNKGDQNKIRETFRNFTDKFPTVSRQWIEYINFELSQDDKSKVQE
LYPNSFRCAVSVDLAKHYIENVRNQVETSDPPEPDPIGNIISIYKYALNHVGLDIESGVI
WQDYLNFLNSIEPMDNILNELRDAYKQALKIPLNNIEEIWKSYKKNEKKVSLPNQQPIKK
QQYDRISTVVKDLRRFTDKINKNIIPTPLKWTKSETEQKHYVEKWVEWEKSNPLRLESVD
LSKRIIYAYKKAMMYMRYYPKIWHDAAEYLVSIRDEDWTSIKNKKVEAKALFGSLIGKEF
KETKEEIAVNLLNTAIEIIPDSLMVNLRYAELKEHLNQNSYRHRDSNPDAFQEAFCENFK
TYESLLAIMDKKYEKIEQDMQAEVDALIKRHDVKETENTTYEDGETRELKRKKQIGLKNE
LLEVEERKKRQLDKIVSAGGIIWINLISFVRRVKGLEEARKLFYEKAVLSRLCTYNVYAE
FALMNSKFARKYIKNAHSTYGAGPDNDNSPAGDDMKIFKLGLDRKELAENPNYIAEYLKF
FIEKNDHINIHSVFEKYIQLIPSDQSKILWDIYCPYVYKYCTLFKIRNIEERRRQIYPQE
SSIKRFADRFGLPDTSLLKNEIGSQFDHVMVPATKTPTVLRNKKETREPAAPERLALLKS
VSQETFIRPKMQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIIN
PAALMNVIVKNNNILVPSVRDRSPARTEGRSRTRQTETFGKQRGGAPKRRRRDYDGEDDD
SSDRGSGPGINRPPEFDLFRARQAKRARGQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcaaatctcaattataatcaagtacatcacgatcaattacaatacagaaac
cttcccgggccaacggcctttcccgggcgaccaccagtcattcctggacagcccggacag
cctgggcaatctgggcaacccgggcaacctggacaacaatctagttttcccgtacaaaca
taccaacagcaacaaacagtatataatcctcaacactctcaacaaatgcctcaacaaaac
actcaacaaatgttatttttacaaccacaacagccaacagcagctgtttacccagcacaa
actatataccagcctcaacaacagcctccatatattctacaacctacagttcctcagact
aggactgaggaaagacccaacaattacgttaatttgcatccaactctgatcaataccagt
aatgctgcaaataccgctcctaatccaacaactacgatagccggaggcataaacagacca
gctgggcgaaagcaatttacaaatggtgtgaacgttaatgaacgacgaacaaatgctaat
tctagtataattaataaacctcatgtcgctacctcatcagcgtcaactaatcaaagacaa
aaagtggtaccagcggagcctggctcatggcagattccgcctgctgcacaacaacaactt
agtgcggtacaacaacgacagagccaacaaattgaaacactcgagcttcgtatagctgaa
aatgtatatgatacggaagcgtggctatctttacttgacgaagtgaaaaataaaggagat
caaaataaaattagagagacgtttagaaattttacagacaaattccccacagtgtctcgt
caatggattgaatacatcaacttcgaattgagccaagatgataagagtaaagttcaagaa
ttatatcctaattcttttcgttgtgctgtttccgttgatctagctaagcattatattgaa
aatgtgcggaatcaagttgaaaccagtgatccaccagaacctgatcctattggaaatatt
atatctatatataaatatgcactaaatcacgttgggttggatatagaatcaggagttatt
tggcaagattatttaaattttctaaacagcatcgaacccatggacaacatactaaatgaa
ttgcgagacgcttacaaacaagctttgaaaattccattgaataatattgaagaaatatgg
aagagttacaaaaaaaacgaaaagaaagtgagccttcctaatcaacaacccattaaaaaa
caacaatatgaccgtatttccacagttgttaaagatttacgtcggttcactgacaaaatc
aataagaatataattccgactcctttaaaatggacaaagtcagaaacagaacaaaaacat
tatgtggaaaagtgggttgaatgggaaaaatccaatcctcttcgacttgagtcggtggac
ctttcaaaaagaatcatttatgcttataagaaagccatgatgtacatgcggtattaccct
aagatatggcatgatgcagctgaatacttggtctcgattagagacgaagactggacctca
attaaaaataaaaaagtagaagcaaaggcattatttgggtccttgattggaaaggaattt
aaagaaacgaaagaagaaatagcagttaatctattgaatactgcaattgaaattattcca
gacagtttgatggttaacttgcgttatgcagaattgaaagaacatcttaaccaaaattct
taccgacatcgtgattctaatccggatgcttttcaagaagcattttgtgaaaattttaaa
acgtatgaatctttattagcaattatggataaaaaatacgaaaagattgagcaagacatg
caagcagaagttgatgctttgataaagagacatgatgttaaagaaacagaaaatactacc
tatgaagatggtgaaactcgagagctaaaaaggaaaaaacaaataggtctcaaaaatgaa
cttttagaggttgaagagcgtaagaaacgtcaattagataaaatagtttctgctggcggt
attatttggataaatctgatatctttcgtaagacgcgtaaaaggtttagaggaggctcgt
aaattattttatgaaaaagcggttttatcacgtctttgcacatataatgtgtatgcagaa
ttcgcgttaatgaattctaaattcgctcgtaaatatataaaaaatgctcattccacttat
ggcgctggtcctgataacgataattcccctgccggtgatgatatgaaaattttcaaatta
ggattagatcggaaagaattagcagaaaatcccaactatatagcagaatatttgaagttt
tttatagaaaaaaatgatcatatcaacatccactcggtctttgagaaatatatccagcta
ataccatctgatcagagcaaaatactctgggatatttattgcccatacgtttataagtac
tgcacgctatttaaaataagaaatattgaagagcgaagaagacaaatttatccgcaagaa
tcgtcaataaaaaggtttgccgatcggtttggtttgcctgacacaagtttattaaagaac
gaaattggctcacaatttgatcacgtcatggttccagcgacaaagacgccaacggtatta
agaaataaaaaagaaacacgcgagcccgctgctcctgaacgactggctttactgaaatca
gtgagtcaagaaacatttatacggccgaaaatgcagtcatcgtggctattatatgatcaa
acggaggcagaaaaagaacagccaaccgttggttcggtttcgggtgcgcctccagaaaaa
attgcaagacatctcgcgacacttactccagtttccaattataaggggccaattataaac
ccggccgcgttgatgaatgtaatcgttaaaaacaacaacattctggtcccttcggtacga
gatagaagcccggccaggactgaaggtcgaagtcgtactcgccaaaccgaaacgtttggc
aaacaaagaggtggcgcacccaagaggagaagacgagattatgatggtgaagacgatgat
tcctcggatcggggtagcggcccaggaatcaatcgcccaccggaattcgaccttttccgg
gcccgccaggccaaacgagctcgtggtcaatga
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