KEGG   Rhizophagus irregularis: OCT59_001875
Entry
OCT59_001875      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
rie  Rhizophagus irregularis
Pathway
rie03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OCT59_001875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rie03009]
    OCT59_001875
Ribosome biogenesis [BR:rie03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    OCT59_001875
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_EML WD40 WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_VPS8 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Tricorn_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR75_1st Beta-prop_IFT122_2nd PEP5_VPS11_N Staph_opine_DH
Other DBs
NCBI-GeneID: 36859824
NCBI-ProteinID: XP_065995329
LinkDB
Position
10:complement(1684651..1687948)
AA seq 756 aa
MEIHRCRFVEYMPSAINALAFTTGTARPLVACGRANGDIEIWNPFSWHLEKRILGELNTS
VESIIWVHKLSLTETDKIIYSTKDEQEKALKELANKSPRLFSGSANGLIIEWDTTKLKSK
KFINSHGGAIWCMAVNHANTLLAIGCDDGGVRIFEITDDGLSLVKNYDRKEAKVTSIAWD
KEDKYIVFGTSNSLIIKWDVEQGREILRITPDKNSRKETIVWAIQVLKDDTIISGDSLGY
VCFWEGTFGTMKQKLGGHDADVLCLVSNMDGTMVYSSGVDRKCVLYRIVPKPKSYGKDNS
VNEKYWVKVGYSRHHMHDVKALAICEERGVNSVISGGVDTTMVFAPTLNFPKSKYYRVPY
VPLKPMINMSKSKKLIMFRSNDHIKIWRLGKAMPPEPDQFKQKIPRLELVEPQKAILEIK
LKGNNQLMASSISENGEWIAVSDVERIKLFKVLEDDDNPVHSNHLKVRKIKDFPQVTIDG
RNVGANLLGFVPNGSKLVVAFMNSEIVVFGLEIDEEDDVYITVLERFDDYSTKPDCEPLT
SLTISEDGKWLATGDLLNQIYVYNLETLKHHMTINQFSSIHTSLTFNPFEPILVITLTSN
QFYLFDLQQKKLTDWSLKYSEKLPQNFLNLKDKIMGCSFNPSSDSMIVWGANYLCLIDFN
KCKIKEGTGNNNELICARCSGQQSKPKFLKKQQSGEQEQKYEKIYTDTISFQLVNRYQTL
MYLNFIKHNQLVVVERSFSSILENLPPSFYKAKYGT
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggagattcataggtgtcgtttcgtagagtatatgccatcagctattaatgctcttgca
tttacgaccggtacggctagacctttagttgcatgtggtcgtgctaatggagatattgaa
atatggaacccgtttagttggcacctagaaaaaagaatattaggtgaattgaatacttcc
gtggaatcaatcatatgggtacataaacttagtttaacagaaacagataagataatttat
agtacaaaagatgaacaagaaaaagctttaaaggaattggctaataaatcgccaagatta
ttctctggtagtgccaatggattaataattgaatgggatacgacaaaattaaaaagcaag
aaatttattaattcacatggaggagcaatttggtgtatggccgttaatcacgcaaataca
ttacttgctattgggtgtgatgatggaggtgtacgaatatttgaaattacagatgatgga
ttatccttagtaaaaaattatgatagaaaggaagcaaaagttacttctatagcctgggac
aaggaagataaatatattgtatttgggacttcgaatagtcttattataaagtgggatgtt
gaacaaggacgtgaaatacttaggataactccagataaaaattcacggaaagaaactatt
gtatgggcaattcaagtgttaaaagatgatactataataagtggtgactcgcttggttac
gtatgtttctgggaaggaacatttggcacgatgaaacaaaaacttggtggtcacgacgca
gatgttttgtgtttggtttcgaatatggatggtacaatggtttattcttctggagtagat
cgtaaatgtgttctatatcgaattgttcctaaacccaaatcatacggtaaggataattca
gtcaatgagaaatactgggtaaaggtaggatatagtcgtcatcatatgcatgatgtgaaa
gctctcgcgatatgtgaagaaaggggtgttaattctgtaatttctggaggtgttgataca
actatggtctttgctccaactttaaatttccctaaaagcaaatattatagggtgccttat
gttcctttaaaacctatgattaacatgtccaaatcaaaaaaattaataatgtttcgatct
aatgatcatataaaaatctggagattgggtaaagcaatgccgccagaaccagatcaattt
aaacaaaaaattcctcgtttggaattagtagaacctcaaaaggctattttagaaataaaa
ttaaagggaaataatcaattaatggcaagttcaatatccgaaaatggggaatggattgca
gtatctgatgttgaacgtatcaaattgttcaaagtcctggaagacgacgataatccagtt
cattcaaatcatttaaaagtacgtaaaataaaagattttcctcaagtaactatagacgga
cgtaatgttggagccaatttattaggatttgttccaaatggaagtaaacttgtagtagct
tttatgaattctgaaatagtagtttttgggcttgaaattgacgaagaggatgatgtttat
ataacagttctggaacgatttgatgactactctacaaaacctgattgtgaaccactaacc
agcttgactataagtgaagatggtaaatggttagcaactggtgatcttctaaatcaaatt
tacgtatataatttagagactcttaagcatcatatgaccattaatcaattttcttctata
catacttcattaacatttaatccatttgaacctatacttgtaataactttgacatcaaat
caattctatctttttgatttacaacaaaagaaattaaccgattggtcattaaaatattca
gaaaaacttccgcaaaactttcttaatcttaaagataagattatgggatgttcatttaat
ccatcttctgatagtatgattgtatggggagcaaattatttatgtttaattgattttaat
aaatgcaaaataaaagaaggcactggtaataataatgaattaatttgtgcgagatgttca
ggacaacaatctaaaccgaaatttttgaagaaacaacaatcaggagaacaggaacaaaaa
tatgaaaaaatatatacggatacgatcagttttcaattagttaatagataccaaacatta
atgtatttaaattttattaaacataatcaattagttgtagtagaaagatcttttagttct
attttagagaatttaccaccatcattttataaagcaaaatatggtacataa

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