Rhizophagus irregularis: OCT59_001875
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Entry
OCT59_001875 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
rie Rhizophagus irregularis
Pathway
rie03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OCT59_001875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_001875
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
OCT59_001875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_EML
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_VPS8
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
Tricorn_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
CFAP43_N
Beta-prop_WDR75_1st
Beta-prop_IFT122_2nd
PEP5_VPS11_N
Staph_opine_DH
Motif
Other DBs
NCBI-GeneID:
36859824
NCBI-ProteinID:
XP_065995329
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Position
10:complement(1684651..1687948)
Genome browser
AA seq
756 aa
AA seq
DB search
MEIHRCRFVEYMPSAINALAFTTGTARPLVACGRANGDIEIWNPFSWHLEKRILGELNTS
VESIIWVHKLSLTETDKIIYSTKDEQEKALKELANKSPRLFSGSANGLIIEWDTTKLKSK
KFINSHGGAIWCMAVNHANTLLAIGCDDGGVRIFEITDDGLSLVKNYDRKEAKVTSIAWD
KEDKYIVFGTSNSLIIKWDVEQGREILRITPDKNSRKETIVWAIQVLKDDTIISGDSLGY
VCFWEGTFGTMKQKLGGHDADVLCLVSNMDGTMVYSSGVDRKCVLYRIVPKPKSYGKDNS
VNEKYWVKVGYSRHHMHDVKALAICEERGVNSVISGGVDTTMVFAPTLNFPKSKYYRVPY
VPLKPMINMSKSKKLIMFRSNDHIKIWRLGKAMPPEPDQFKQKIPRLELVEPQKAILEIK
LKGNNQLMASSISENGEWIAVSDVERIKLFKVLEDDDNPVHSNHLKVRKIKDFPQVTIDG
RNVGANLLGFVPNGSKLVVAFMNSEIVVFGLEIDEEDDVYITVLERFDDYSTKPDCEPLT
SLTISEDGKWLATGDLLNQIYVYNLETLKHHMTINQFSSIHTSLTFNPFEPILVITLTSN
QFYLFDLQQKKLTDWSLKYSEKLPQNFLNLKDKIMGCSFNPSSDSMIVWGANYLCLIDFN
KCKIKEGTGNNNELICARCSGQQSKPKFLKKQQSGEQEQKYEKIYTDTISFQLVNRYQTL
MYLNFIKHNQLVVVERSFSSILENLPPSFYKAKYGT
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagattcataggtgtcgtttcgtagagtatatgccatcagctattaatgctcttgca
tttacgaccggtacggctagacctttagttgcatgtggtcgtgctaatggagatattgaa
atatggaacccgtttagttggcacctagaaaaaagaatattaggtgaattgaatacttcc
gtggaatcaatcatatgggtacataaacttagtttaacagaaacagataagataatttat
agtacaaaagatgaacaagaaaaagctttaaaggaattggctaataaatcgccaagatta
ttctctggtagtgccaatggattaataattgaatgggatacgacaaaattaaaaagcaag
aaatttattaattcacatggaggagcaatttggtgtatggccgttaatcacgcaaataca
ttacttgctattgggtgtgatgatggaggtgtacgaatatttgaaattacagatgatgga
ttatccttagtaaaaaattatgatagaaaggaagcaaaagttacttctatagcctgggac
aaggaagataaatatattgtatttgggacttcgaatagtcttattataaagtgggatgtt
gaacaaggacgtgaaatacttaggataactccagataaaaattcacggaaagaaactatt
gtatgggcaattcaagtgttaaaagatgatactataataagtggtgactcgcttggttac
gtatgtttctgggaaggaacatttggcacgatgaaacaaaaacttggtggtcacgacgca
gatgttttgtgtttggtttcgaatatggatggtacaatggtttattcttctggagtagat
cgtaaatgtgttctatatcgaattgttcctaaacccaaatcatacggtaaggataattca
gtcaatgagaaatactgggtaaaggtaggatatagtcgtcatcatatgcatgatgtgaaa
gctctcgcgatatgtgaagaaaggggtgttaattctgtaatttctggaggtgttgataca
actatggtctttgctccaactttaaatttccctaaaagcaaatattatagggtgccttat
gttcctttaaaacctatgattaacatgtccaaatcaaaaaaattaataatgtttcgatct
aatgatcatataaaaatctggagattgggtaaagcaatgccgccagaaccagatcaattt
aaacaaaaaattcctcgtttggaattagtagaacctcaaaaggctattttagaaataaaa
ttaaagggaaataatcaattaatggcaagttcaatatccgaaaatggggaatggattgca
gtatctgatgttgaacgtatcaaattgttcaaagtcctggaagacgacgataatccagtt
cattcaaatcatttaaaagtacgtaaaataaaagattttcctcaagtaactatagacgga
cgtaatgttggagccaatttattaggatttgttccaaatggaagtaaacttgtagtagct
tttatgaattctgaaatagtagtttttgggcttgaaattgacgaagaggatgatgtttat
ataacagttctggaacgatttgatgactactctacaaaacctgattgtgaaccactaacc
agcttgactataagtgaagatggtaaatggttagcaactggtgatcttctaaatcaaatt
tacgtatataatttagagactcttaagcatcatatgaccattaatcaattttcttctata
catacttcattaacatttaatccatttgaacctatacttgtaataactttgacatcaaat
caattctatctttttgatttacaacaaaagaaattaaccgattggtcattaaaatattca
gaaaaacttccgcaaaactttcttaatcttaaagataagattatgggatgttcatttaat
ccatcttctgatagtatgattgtatggggagcaaattatttatgtttaattgattttaat
aaatgcaaaataaaagaaggcactggtaataataatgaattaatttgtgcgagatgttca
ggacaacaatctaaaccgaaatttttgaagaaacaacaatcaggagaacaggaacaaaaa
tatgaaaaaatatatacggatacgatcagttttcaattagttaatagataccaaacatta
atgtatttaaattttattaaacataatcaattagttgtagtagaaagatcttttagttct
attttagagaatttaccaccatcattttataaagcaaaatatggtacataa
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