Rhizophagus irregularis: OCT59_001912
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Entry
OCT59_001912 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rie Rhizophagus irregularis
Pathway
rie03020
RNA polymerase
Brite
Enzymes [BR:
rie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OCT59_001912
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
OCT59_001912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36866398
NCBI-ProteinID:
XP_025181490
LinkDB
All DBs
Position
10:complement(1836667..1843392)
Genome browser
AA seq
1415 aa
AA seq
DB search
MKEQILEQAPRRIKHIQFSVLSPQEIVKNAQLAITHRDLFNDNRKPMENGVLDTRLGTSD
HDTLCQTCGEKMAQCIGHFGYVKLILPVFHIGYFKAVINMLQNICKTCSRVLLNEDDRRS
YLKRIRASRESSARQKLEKAINTLCKKEVDCPHCGAINGSVKKVGALKIVHEKFKSKKAH
EEHEKFKSTFNNAIEYTPDLRPHLHKAQEDLNAMKVLDLFKRISDDDCELLGLDPQNARP
ELFIWQRLPVPPVAIRPSIAQDNASTEDDLTVKLSEIVQTNTNITAALTKGVTITQLMEQ
WDYLQLTIAMYIHSEMPGLGNMAGIKPSRGLCQRLKGKQGRFRGNLSGKRVDFSGRTVIS
PDPNLRIDEVAVPELVAKILTYPERVFAHNIDKLRQCVINGADVHPGANFVKHKSGGKRF
LKYADQASKDACAAELQIGDVVERHLRDDDVVLFNRQPSLHKLSIMAHYVRVKPWRTFRF
NECVCSPYNADFDGDEMNLHVPQTEEARIEAIELMGVKNNLVTPRNGDPIIAAIQDFITS
SYLLTKKDVFYNRAQFTQICSYMADADIHIDIPPPSIWKPMKLWTGKQIFNVLMRPNKKS
SVLVNLEAKGRSFDKKEGRVPDFCPNEGYAVIQNSEIMCGCMDKTLVGDGNKHSLFYTIL
RDFGSLEAASAMNRLSKLCSRWLANRGFSIGINDVQPGEKLRERKEELIGMANKRCNELI
EQSKLGLIENQPGCDEEQTLETHISGVLSKVRDDAGQICMTELNKYNAPLIMATCGSKGS
KINVSQMVACVGQQIISGSRIPDGFQDRSLPHFPKHSKTPAARGFVRNSFYSGLSPTEFL
FHAISGREGLVDTAVKTAETGYMQRKLMKALEDLTIHYDMSVRNSSGGLVQFYYGDDGLD
PAFLEAEILPVDLKRNLQHIINIVSWGNDKVLLPYEIREITDSILGSDKFVKLCTQSYIE
SLSNFVQQELVNRLSSIRESYGLMRGDYRLSEEYGDLDDAVYNTMGSNPVKAVVNHKLKI
TEKQLRRFLDTCWTKFMRAKIEPGTAVGALGAQSIGEPGTQMTLKTFHFAGVASMNITLG
VPRIKEIINASKTISTPIITCKLVNDTDVKSARIVKGRLETTYLGDIAKYIDEIYERDQC
FLAIKLDLEAIQKLQLETNIKEIARAIIDNRSLKLEAHGIRVVSDDEIDVYISDKEMSKD
PYCLYYRLQVLKRALPKVIVKGIQTVTRAVISEGKGGKKLLLVEGYGLREVMTTEGIVGI
ETTSNNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIH
RFGISNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIR
KSQFENEKPPKRKLIFDTKENHVKFTYGDTAIDDA
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcaaattctcgagcaagctccacgaagaattaaacatattcaatttagtgtt
ctttctcctcaagaaatcgtcaaaaatgctcaattagcaattacgcatcgcgatcttttt
aacgataatcgaaaacccatggagaatggcgttctcgatacgcgattgggaacatcggat
catgacacattgtgtcaaacatgtggagaaaaaatggctcaatgtatcggtcatttcggt
tatgttaaattgatattaccagtatttcacattggatattttaaggccgtaataaatatg
ttacaaaatatttgcaagacatgtagtcgagttttactaaacgaagatgatcgtcggtca
tatctgaaacggataagagcttctagagagtcatctgcgcgtcaaaaactcgaaaaagct
ataaatactttgtgtaaaaaagaagtggattgtccacattgtggagcaataaatggatct
gtcaagaaagttggtgcactcaagatcgttcatgaaaaattcaaatcaaagaaagcacat
gaagagcacgaaaaattcaagagtacatttaataatgcgatcgaatatacaccagatctt
agacctcatttacataaagcacaagaagatttaaatgccatgaaagttcttgaccttttt
aaaaggatatctgatgatgattgtgaattacttggattagatcctcaaaatgcgcgacca
gaactttttatatggcaacgccttccagtaccacctgtagcgattcgtccttcaattgcg
caagataatgctagcacagaagacgacttgacggtgaaattatcagaaatcgtccaaaca
aataccaatattacagcagctttaactaaaggagtaactataacacaacttatggaacaa
tgggattacttacaattaacaattgccatgtacatacatagtgaaatgccaggattagga
aatatggcgggtataaaaccaagtagaggtttatgtcaacgattgaaaggcaaacagggt
agatttcgtggaaatttatctgggaaacgtgttgatttttctgggcgtacagtaatttca
ccagatccgaatttacggattgatgaggttgctgttccagaactagtagcaaaaattttg
acttatccggaaagagtatttgcacataatattgataagttgcgtcagtgcgtaataaat
ggtgccgatgttcatcctggcgccaattttgttaagcataagtctggagggaaaaggttt
cttaaatatgctgaccaagcatcaaaagatgcttgtgctgccgagttacaaataggagat
gttgtagagcgacatttaagagatgatgatgttgtcttatttaatcgtcaaccatcttta
cataaacttagtataatggcccattatgttcgagtcaaaccatggagaacttttcgtttt
aatgaatgtgtttgtagtccttataatgcagattttgatggtgatgaaatgaatcttcat
gtacctcaaactgaggaagctcgaattgaagcaatagagttaatgggcgtaaaaaacaat
ttggttacacctagaaatggagatcctatcattgctgcaattcaagattttatcacatca
tcatacctacttacaaaaaaagacgtgttttataatcgagcacagtttacacaaatttgt
tcatatatggcagatgctgatatacatattgatatacctccaccttcaatatggaaacca
atgaaactttggacagggaaacagatttttaatgtattaatgagaccaaataagaaatcg
tcagttttagttaatcttgaagccaaaggacgttcatttgacaagaaggagggcagagtg
cccgatttttgtccaaatgaaggttacgctgtcattcaaaatagcgagattatgtgtggt
tgtatggataaaaccttggtaggagatggtaataaacattcattattttatacgatactc
cgtgattttggatcattagaggctgctagtgcaatgaatcgtttatctaagttatgttca
cggtggttagctaacagaggattttcaattggcataaatgatgtgcagcccggtgaaaaa
ttaagggaaagaaaagaagaactcattggaatggcaaacaaaagatgcaatgaactcatt
gaacaatctaaattaggtttgatagaaaatcaacctggttgtgatgaggaacagacattg
gagacccatatatctggcgttctatcaaaagttcgtgatgatgcaggtcaaatttgcatg
acagaactaaacaaatataatgcacctcttattatggcaacctgtggttcaaaaggttca
aaaattaacgtatctcaaatggttgcctgtgttggtcaacaaattattagtggtagccga
attcctgatggattccaagatcgttctttaccacatttcccaaagcattcaaagacacca
gcagctcgaggttttgttaggaacagtttctatagtggtttgtctccaacagagttttta
tttcatgccatttccggtcgtgaaggtcttgtagatactgctgtcaagactgccgaaact
ggttacatgcaaaggaagttgatgaaggctttagaagatctgacaattcattatgatatg
tcggtacgaaattcatcaggtggtttggttcaattttattatggtgatgatggtttagat
ccagcttttcttgaagcagaaattcttccggtggaccttaaacgtaatttacaacatata
ataaatatagtttcatggggtaatgataaagtgctgttaccatatgaaatccgagaaata
acagatagtattttgggaagtgataaatttgtgaaattatgtactcaatcctatattgaa
tctttgagtaattttgttcaacaagaacttgttaatagattaagttctatacgagaatca
tatggtttaatgagaggagattatagacttagtgaagaatatggagatcttgatgatgca
gtttataatactatgggttcaaatcctgttaaagctgttgtaaatcacaaattaaaaatt
actgaaaaacagcttcgaaggtttttagatacttgttggacaaaatttatgagggcaaag
attgagccaggaacggctgttggagctcttggcgcgcaatccattggggaaccaggaact
caaatgacgctgaaaactttccattttgctggtgttgcatcaatgaatattactcttggt
gttccgcgtataaaggaaattattaatgcatctaaaacaattagtacaccgatcattact
tgtaagcttgtcaatgatactgatgtgaaatcagctagaattgttaaaggacgtttagaa
acaacatatctgggtgatattgcaaaatatattgatgaaatttatgaacgtgatcaatgt
tttcttgcaattaagttggatttggaggcaatacaaaaattacagttggaaacaaatatt
aaagaaatagcacgcgcaattattgataatcgtagcttaaagcttgaagctcatggaatt
cgtgtagtttcagatgatgaaattgacgtttatatttcagataaagagatgtcaaaagat
ccatattgtttatattataggttacaagttttaaaacgagccctgcctaaagttatagta
aaaggaatacagactgttacgagagctgtaattagtgaaggcaagggaggaaagaaatta
ttgttagttgaaggatatggacttcgtgaagttatgacaaccgaaggtattgttggtatt
gaaacaacaagtaataatattaatgaagtacataaagttcttggtattgaagcagctaga
aatacaattattcaagaaattcaatatacgatgggtagacatggaatgagtattgaccca
agacatgttatgttattaggagatataatgacattcaagggtgaagtactaggaattcat
cggtttggtatttcaaatatgaaaagtagtgttcttatgttggcatcatttgagaagaca
acagatcatctttttgatgctgcattacacagtaaacgtgattgtcttgaaggtgtaagt
gaatctataattatgggaatgcctatgcaacttggaactggtttattcaagttaataaga
aaatcacaatttgagaatgaaaaaccaccaaaaaggaaattaatatttgatacaaaagaa
aatcatgtaaaatttacatatggggatacagcaattgatgatgcttag
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