Rhizophagus irregularis: OCT59_001935
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Entry
OCT59_001935 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
rie Rhizophagus irregularis
Pathway
rie04138
Autophagy - yeast
rie04144
Endocytosis
rie05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
OCT59_001935
04138 Autophagy - yeast
OCT59_001935
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
OCT59_001935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_001935
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rie04812
]
OCT59_001935
Membrane trafficking [BR:
rie04131
]
Others
Actin-binding proteins
Arp2/3 complex
OCT59_001935
Cytoskeleton proteins [BR:
rie04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
OCT59_001935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
RMC1_N
EIF3I
Beta-prop_HPS5
WDR55
DPPIV_N
Rax2
eIF2A
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
36866378
NCBI-ProteinID:
XP_025181464
LinkDB
All DBs
Position
10:1921385..1923217
Genome browser
AA seq
369 aa
AA seq
DB search
MSSTEVYQLNFGPITAHSFNKDRTQVAICPNNNEVQIYTKAGKSWNLIHTLAEHDKLITS
IDWAPESNRLVTSSQDRNTYVWNLDETGEWKPTLVLLRINRAATFVRWSPNENKFAVASG
ARVIAICYFDEEHNWWTSKHLKKPIRSTVLSLDWHPNNTLLASGSADFKACVISAFIKGV
DKRPPPTAWGEKFPFNTVLGEFSNGSGGWIHSVAFSPSGEALAFAGHDSEISIAYPGGAI
KNIRLTGLPYLSLLWTSEDKIIAAGYDCAPVLFEKANEEWKLSRIIDAGKKKVMGESTAF
NRFRDWDSKGRGGSEDSELNTIHQNTITSIRHYAGTRENVTHFSTSGLDGKLVTWDLESL
ENQFRNLKV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaccgaggtttatcaacttaactttggtcccattacggcccattctttcaat
aaagatcgaacacaggttgcaatttgtcctaataataatgaagttcaaatatacacaaag
gctggtaaaagctggaatttaatacacaccttagcggaacacgataaacttataactagc
atcgattgggctccagaatcaaatcgattagttacaagttctcaagatcgtaatacttat
gtctggaatcttgacgaaactggtgaatggaaaccaactttagtgttgctccgaattaat
cgtgctgcaacatttgttcgttggtccccaaatgaaaataaatttgctgttgcatctggt
gcacgcgttatagcaatatgttactttgatgaagaacataattggtggactagtaaacat
ttgaaaaaaccaattagaagtaccgtgttaagtctagattggcatcctaataatacactt
ttagcttcaggtagtgctgatttcaaggcatgtgttatatctgcatttattaagggtgtt
gacaaaagaccaccgccaacggcgtggggtgaaaagtttccattcaatactgtccttggc
gaattctccaatggtagcggtggatggatccatagtgtcgctttttcacctagtggtgaa
gctttagctttcgcaggtcatgactctgaaattagtattgcttatcctgggggtgctatt
aaaaacattaggttaactggtttaccgtatctaagtttactctggacatctgaagataaa
ataattgcagctggctatgattgtgcacctgtattatttgaaaaagctaacgaagaatgg
aaattatcaagaataattgatgccggaaaaaagaaagtcatgggcgaatcaactgccttt
aatagatttcgcgattgggactcaaaaggtcgcggtggtagtgaagattctgaattgaat
actattcatcaaaatacaataacttcaattcgacattatgcagggacacgtgaaaacgta
acacatttttctacaagtgggttagacgggaaattagttacttgggatttagaaagtctt
gaaaaccaatttagaaacttaaaagtataa
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