Rhizophagus irregularis: OCT59_002004
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Entry
OCT59_002004 CDS
T10295
Name
(RefSeq) Iron-sulfur clusters transporter atm1 mitochondrial
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
rie Rhizophagus irregularis
Pathway
rie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCT59_002004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rie02000
]
OCT59_002004
Transporters [BR:
rie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
OCT59_002004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_14
AAA_28
AAA_18
ATPase_2
AAA_21
Rad17
AAA_5
AAA_29
RsgA_GTPase
MMR_HSR1
ATP-synt_ab
AAA_23
AAA_25
Motif
Other DBs
NCBI-GeneID:
36860836
NCBI-ProteinID:
XP_065995379
LinkDB
All DBs
Position
10:complement(2165321..2168630)
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AA seq
727 aa
AA seq
DB search
MLIRGLTTTLHQNLSARVTVYLTVPTSTPLQFKVYSSFLQKRTLHYIVNRKANLISCSTV
FLKNCRKRGQIQTVISNPIWNIRYFAVNTKAPLKKSLKEPTLPASRPPAAIDKTIRTTQT
STDWKIIKNLVRYIWPKDDPAVKIRVVTALSLLVAGKLLNVQVPFFFKHVVDSLNIDMSQ
FGTVWTIAGAMIIGYGAARIGSTIFQELRNAIFANVAQKAIRKLARNVFYHLHQLDLNFH
LSRQTGGLSRAIDRGTKGISFLLSSLVFHVIPTALEISIVCSILVYNYGTHFATVTALTM
LTYAVFTIKTTSWRTKFRKEANQADNEAATVAVDSLINYEAVKYFNNEKFETEQYDKALE
KYEKASLKIATSLSLLNSGQNIIFSSALTTMMFLAAQGVVSGNLTVGDLVMVNQLVFQLS
LPLNFLGSVYRELRQSLIDMDIMFNLQGVNISIKDSLNAKPLMHKGGEIKFEDVIFGYHP
DRLILKGISFTVPRGKKVAVVGPSGCGKSTILRLLFRFYDPQSGNIYIDGQNIKDVTLES
LRANIGVVPQDTSLFNNTIYHNIAYGQITADRDKVESAAKRARIHNVIMSLPDKYKTLVG
ERGLMLSGGEKQRIALARTILKDPPIIFFDEATSALDTHTEQSLLSNIRSILQESQKTSM
FVAHHLSSIADADKIIVLRDGAIVEQGTHDVLMQKEDGIYREMWFTQEMSDPAFEEEEEI
SEFYKEI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgttaattagaggtcttacaacaaccttgcaccaaaatttaagtgcaagagtcacagtc
tatttaacagttccaacttcaacaccgcttcaatttaaagtttacagctcatttttacaa
aaaagaacgttacactatattgttaacagaaaagcaaatcttattagctgctcaacagta
tttttgaagaattgtcggaaacgaggacaaattcaaactgttatctcaaatccaatatgg
aacattcgctattttgctgtcaatacgaaagcccctttaaaaaaatcactcaaagaacct
acactacccgcttctcgtcccccggctgctattgataagactatcagaacaacacaaact
tctacagattggaaaattattaaaaatctggtccgttatatttggccaaaagatgatccg
gctgtcaaaattcgggtggtaactgccttatcattgttggttgcgggcaaactccttaat
gtgcaagttccatttttttttaaacatgtagtcgactccttaaatattgatatgtcacaa
tttggaacagtatggacgattgctggagcaatgataatcggatatggtgcagctcgcatt
ggttcgactatatttcaagaattaagaaatgcaatattcgcaaatgtggcccaaaaagcc
attcgtaagcttgctaggaatgtgttttatcacttgcatcaacttgatttaaatttccat
ttatctcgccaaactggtggtttaagtagggctattgatcgtggaacgaaaggtataagc
tttttgctttcatcccttgtttttcatgtaatacctactgcattggaaatatccattgtg
tgtagtattttggtatataattatggcacgcactttgcaacagttacggcacttacaatg
ctaacttatgcagttttcaccattaaaacaacatcatggcgaacaaaattcagaaaagag
gctaatcaagctgataatgaagctgccacagttgcggttgattccttgattaattatgaa
gccgtaaagtattttaataatgaaaaatttgaaacagaacaatatgataaggctttggag
aaatatgagaaagcatctcttaaaattgcgacatctctttccctcctaaattcgggacaa
aatattatatttagtagtgcgttgaccactatgatgtttctggctgctcaaggggttgtt
tcagggaatcttacggtcggtgatttggtgatggtcaaccagctcgtatttcaattatct
ttacctctcaattttctcggttcggtatatagggaactgcgtcaaagtttgattgatatg
gacattatgttcaatttacaaggagtgaatatttctatcaaggattcactcaacgcaaaa
cctttaatgcataaaggtggtgaaataaaatttgaagatgttatatttggataccaccct
gaccgcttaattttgaaaggaataagttttactgtacctagaggaaagaaagttgcagtg
gtaggaccaagtggatgtgggaaatcaactattctccgattacttttccggttttacgat
ccacagagcggtaacatatatatcgatggacaaaatattaaagatgtaacattggaaagt
ttaagagcgaacatcggtgttgtgccgcaagatacttcccttttcaacaacacaatttat
cataacattgcatacggtcagataactgctgatcgggacaaggttgaatccgcagctaag
cgtgcacgtatacataatgttattatgtcattgccagacaaatacaaaacgctcgtaggt
gaacgaggcttaatgctttctggaggcgaaaaacagagaattgcgttagcaagaacaatc
ctgaaagatcctccgataatattttttgacgaagcgacttctgctttggatacacatact
gaacaatcgcttttatctaatatccgaagtatccttcaggagagtcaaaaaactagcatg
tttgttgcacatcacttaagttctattgccgatgcggataaaataatcgtattaagagat
ggagctatagtggaacaaggaactcatgatgttcttatgcaaaaagaggacggtatttat
cgagaaatgtggttcacacaagaaatgtccgatcccgcctttgaggaagaggaggagatc
tccgaattttataaagaaatttaa
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