KEGG   Rhizophagus irregularis: OCT59_003836
Entry
OCT59_003836      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
rie  Rhizophagus irregularis
Pathway
rie03020  RNA polymerase
rie03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OCT59_003836
  09124 Replication and repair
   03420 Nucleotide excision repair
    OCT59_003836
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rie03021]
    OCT59_003836
   03400 DNA repair and recombination proteins [BR:rie03400]
    OCT59_003836
Transcription machinery [BR:rie03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     OCT59_003836
  RNA polymerase III system
   RNA polymerase III
     OCT59_003836
  RNA polymerase I system
   RNA polymerase I
     OCT59_003836
DNA repair and recombination proteins [BR:rie03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OCT59_003836
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 36859387
NCBI-ProteinID: XP_025184948
UniProt: A0ACH0GDW7
LinkDB
Position
12:complement(1297377..1298637)
AA seq 178 aa
MSDYGDDYDAPDDAGYEELPEDDYNEPDILEEELEPELPNGFGGDEVREGGINVQNGVAI
LTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILVPRENETDP
LEIAKKELRFKKIPLMIRRYLPDGSFEDWNVRDLIIPEDEDYGRTTNPGQGQSSQPLQ
NT seq 537 nt   +upstreamnt  +downstreamnt
atgtcagattacggtgacgattatgatgctcccgacgacgcaggatatgaagaacttcca
gaggatgattataatgaaccagatatattagaagaagaacttgaaccagaacttccaaat
ggatttggtggagatgaagtaagagaaggagggatcaatgtacaaaatggagttgcaata
ttaacaaatggtgcagagggcacagaaatggatgttaataagcaagtaactgtagaaaag
gagaaagttactactccttacatgacaaagtatgaaaaggcacggatattgggcactcga
gcgttacaaataagtatgaacgctccaattcttgttccacgtgaaaatgaaacggatccc
cttgagatagctaaaaaagagcttcgttttaaaaaaattcccttaatgatacgaagatat
ttaccagatggaagttttgaagattggaatgtcagagatttgattattcctgaagatgaa
gattatggtagaacgacaaacccaggacaaggacaatcatcacaaccattacaataa

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