Rhizophagus irregularis: OCT59_003978
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Entry
OCT59_003978 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_003978
Spliceosome [BR:
rie03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
OCT59_003978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
Bromodomain
Motif
Other DBs
NCBI-GeneID:
36865085
NCBI-ProteinID:
XP_025184289
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All DBs
Position
12:1876083..1878134
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AA seq
443 aa
AA seq
DB search
MGGGDLNMKKSWHPLLIKNQERVWKEEQKASEEQKKLNQLKKEKEEERQLQELRQIQESA
GGRKGQERLDWMYAAGPNQSSSAKAQELEDYLLGKKRIDSLIEQGTSIDKLSADSKEIFS
SISNPNANNYRDTQSKIREDPLFLIKKTEQANIKSIVSNPLKMKEIQEKLEKKKSKKEKK
KSSNKWNKDSSSDHKEKSKKDKKRPLSGSEEESIMRLREQDRNGRSQKRPRLRSLSRSRS
RSRDRYDDRHRYESKYSNGTMRDRNSHEGRHESRYSNRDRDTYDRNREGRNDRESRYNPR
SYSPRRPRSPSSPSRREEYNRNNRKYNNYSHNRDYKERKEHNGRSERDKIKEKEEAERKL
LEMMEDAKKVTEERKSRLEQAIKEEEEEERKLAEDKKRSQENGTQSDFLKNAYKCAYSSH
SSIGLGERLQRHRGASHKISIED
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggcgacttgaatatgaaaaaatcctggcatcccctcttgatcaaaaatcaa
gagcgggtatggaaggaagaacaaaaagcatcagaagagcagaagaaacttaaccaactc
aaaaaagagaaagaagaagaaagacagttacaagaattgaggcaaatccaagaatctgct
gggggaagaaaagggcaggaaagattagattggatgtacgctgctggacctaatcaatct
agctcagcaaaagcccaagaattggaagattatttacttggaaaaaaacgtattgattct
cttatagaacaaggcacttctattgataaattgtctgctgattcaaaagaaatctttagt
agtatcagtaatcctaatgctaataattaccgagatactcaatcaaaaattcgagaagat
ccattatttcttattaagaaaactgagcaagccaacataaagtccatcgtttcaaaccca
cttaaaatgaaagaaattcaagaaaaattagaaaagaaaaagagtaaaaaagaaaaaaag
aaatcaagtaacaaatggaataaagattcatcttcggatcataaagaaaagagtaaaaaa
gacaaaaagaggcctctatcaggttctgaagaagaaagcataatgaggttaagagaacaa
gataggaatggtcgatctcaaaagcgacctcgcttacgaagtttatcacggtctcgttct
cgttcaagggacagatatgatgatagacatcgatatgagtccaaatattcaaatggtaca
atgagggatcgaaattcacatgaaggacgacatgagtctcgatattcaaatagagatcgt
gacacatatgatcgaaatcgggaaggaagaaatgatcgtgaaagtagatataatcctcgt
agttattctcccagaaggcctagatcaccatcatcacctagtagacgagaagagtataat
cgaaataatcgtaaatataataattattcacataacagagactataaagaacgaaaagaa
cataatggacgaagtgaaagagataaaattaaggaaaaagaagaagctgaaagaaaactt
cttgaaatgatggaagatgcaaaaaaagttactgaagagcgaaagagtcgtttagaacaa
gccattaaagaagaggaagaggaagaaaggaaattggcagaggataaaaagcgatcacaa
gaaaacgggacgcaatccgactttttaaagaatgcttataagtgtgcgtattcttcacac
tcttcaattggtttaggagagcgtttacaaagacatcgtggcgcttcacataaaatttcg
atcgaggattaa
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