Rhizophagus irregularis: OCT59_004302
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Entry
OCT59_004302 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14290
exportin-1
Organism
rie Rhizophagus irregularis
Pathway
rie03008
Ribosome biogenesis in eukaryotes
rie03013
Nucleocytoplasmic transport
rie03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OCT59_004302
03008 Ribosome biogenesis in eukaryotes
OCT59_004302
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
OCT59_004302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_004302
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_004302
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_004302
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_004302
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
OCT59_004302
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
OCT59_004302
Pre-60S particles
OCT59_004302
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
OCT59_004302
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
OCT59_004302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Topoisom_bac
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Toprim
mTOR_dom
TPR_TNPO3_IPO13_2nd
BID
BIG2_C
LSM
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
36866194
NCBI-ProteinID:
XP_025181969
LinkDB
All DBs
Position
12:3530372..3538521
Genome browser
AA seq
1910 aa
AA seq
DB search
MESEKVLCVAEKPSVAKEIAKILSGNRFVMRNSRINYIKNYEFKCQLNSKEVQVIITSVC
GHINALDFPSQYAKWESCSPTVLFDAPIIKKTIDENAECIRENIFNIAHSVSHLMIWTDC
DREGEKIGSDIVDICRMANSDIVVSRARFSAIIPPQIKQAWESPVQLDMNQAEAVNTRME
LDLRIGYAFTRYQTLGLRQIFPELGNGILSYGSCQFPTLGFVVERYKAVENFVKEKFWKI
HVVVDRDDTIVNFNWDKGVLFNVNCCNAIYCDLMMDQPVIATVVEVVTKETRKYKPFPLT
TVELQKAGCRFLHISSAEIMKIAEDLYNKGFISYPRTETDQFDHQFNFKDLIQAQSQDPR
WGDFASSLLDKRITTRKGKHNDQAHPPIHPVQYATGLTGKEKTVYEFVVRRFLACCSDDA
KGNETTVKIKIKEEYFTAKGLVITENNYLDVYPYDRWSDKNLPNFILNETFTPKECTMEE
GETTPPEYLTEAELINTMDKNGIGTDATIHEHIKKIIDREYVEKQDQGNKTYLIPSNLGL
AIVEGYDSIGFNESLTKPLLRAKMEQNLKEICEGTREKNDVLTENVNKYRDMFLVTHNNL
QLLIGGFAKYFTSGTDDVHRVFNDIINVENPKLVRWCRDSWPMYLKKIQNNWIISCINYP
NCNYDGFFFNSPNSIKSITVNNEVCSICSRNPLQPVYYLTIVYRTNRIIRGCFGGCDDNM
DMLLSRSSGTNNKPRNIDADSNSRRGRGSGSVTRGRSSRDDGENDIQGTRGSRGSRGSRV
SKRGGRGSRGRAGRGFTSARGSGRGRGRGRGRGRGRGRGSNDGSYDNEPSCLCYKTSMES
ILDFTQEFDVDKLDATVRTFYTGVGEEQKKAQTVLTQFQNHPDAWLKVDAILDKSKFTHT
KFIALQILEKLIQQKWKILPPEQQAGIRSFIVNIIVATSDNEQSLRKEKTYLNKLNLILV
QILKQEWPHNWPQFIPEIVSTGRSNVTICENNMAILKLLSEEIFDYSAEQMTQLKTKNLK
TQMCHEFSKIFELCNEVLEKAHQPSLIKATLETLLKFLNWIPLGYIFETNIIENLRNRFM
ESAEYRNVTLKCLSEIGALNVSHEYDDKFIALFNMVVAALESMVPVSADFATIYKNSSNE
EQEFIQNLALFFTGFLSTHLKIMESQQNSQPLLKAHYYLLRISQVEEREVFKVCLEYWTK
LVAELYEEIQNLPVLEMPLLSITGVSSPPSTLANIPLRKHMYSDILTNLRVIMIDRMVKP
EEVLVVENDEGEIVREFMKDCDTITLYKSMRECLVYLTHLDVQDSEIIMSNKLTKQIDGS
EWSWNNLNKLCWAIGSISGAMNEDTEKRFLVTVIKELLSLCEQKRGKDNKAVVASNIMYI
VGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRQFISQQQGET
TPFIDEIISGIETITKDLSPQQVQTFYEAVGYMISAQTNKTIQERLVMNYMELPNQGWDR
ILEDISKDINALYVAENTKILGHVLRTNVAACSAVGSGFSVQIARIYVTLLELYKAVSQI
ISDTVANEGLIATKTPRVRNLRVIKKETLKLMEVYITKSEETSQIITHLMPPLLSAVLID
YNNNVEQARDAEVLSSMATIIAKLGPGITNEVPAILNAVFECTLNMINKDFSEYPEHRVG
FFKLLRAINQHCFPALLTLPSAQFKLIMDSIVWAFKHTMRDIADTGLNICLELINNISMQ
DPATANMFYQQYFLTLVADVLFVLADTDHKSGFKMQCSVLQRMFNLVETGAVQSPLFNPA
EVQDPNMTNQRFLREYVMNILHNAFPHLQSIQVQSFVMGLFELNQDNTKFKLHLRDFLIQ
LKEFAGDNADLYLEEREAEAEQRKRTEMENALKIPGLVKPADLPPMEDEE
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaaaaagtgctttgtgttgccgaaaaaccttcagtagcaaaagaaatagct
aaaattttgtccgggaatcgttttgtaatgagaaattctagaataaattatataaagaat
tatgaattcaagtgtcagttgaatagtaaagaagtccaagtaataataacttcagtttgc
ggacatatcaacgcactcgattttcctagccaatatgccaaatgggaaagttgttcgcca
actgttttattcgatgcgcctattattaaaaaaactattgatgagaacgcggagtgtata
agagaaaacatctttaacatagcgcattccgtaagccatttgatgatatggaccgactgt
gatcgagagggcgaaaaaattggttcggacattgtagacatttgtcgtatggccaattct
gacatagttgtatcacgtgcaagattttcagcaattataccaccacaaattaagcaagca
tgggaatcacctgtgcaacttgatatgaatcaagccgaagcagtcaacactagaatggaa
ttagatttgcgtatcggatacgcattcactagataccaaacattaggtttaaggcaaatt
tttccagaactaggaaatggaatattgagctatggctcatgtcaatttccaacactaggt
tttgttgttgagaggtacaaagctgtcgaaaattttgttaaagaaaaattctggaaaata
catgttgtagtagatcgagatgacacaatagttaattttaattgggataagggtgtatta
tttaacgtaaattgttgcaatgcaatatattgtgatttgatgatggaccagccagtaata
gcaactgtagtagaagttgttactaaagagacgagaaaatataagccatttccgttaact
acagttgaattacagaaagcaggatgccggttcttacatatttcatctgccgaaatcatg
aaaattgcggaagatttatataataaaggttttataagttatccgagaacggaaactgat
caatttgatcatcaatttaactttaaagatttgatacaagcacaatcacaggatccaaga
tggggagatttcgcgtcaagcttgcttgacaaaaggataactacaaggaaaggtaaacat
aatgatcaagctcatcctccaatacatccggtccagtatgcaacaggattaaccggcaaa
gaaaagactgtatatgaatttgttgttcgaaggtttttagcttgttgttcggatgatgct
aaaggaaatgaaactactgttaagatcaaaatcaaggaagaatattttactgctaaagga
cttgttattacagaaaacaattatttggatgtatatccatatgatcgttggagtgataaa
aaccttccaaattttattcttaatgaaacgtttacaccaaaagaatgtacgatggaagaa
ggtgaaacaacgccaccggaatatttaaccgaagcagaacttattaacactatggacaaa
aatggtattggtaccgacgcaacaattcatgaacacatcaaaaaaataattgatcgtgaa
tacgttgagaaacaagatcaaggaaacaaaacctatttaatcccatctaatttgggactc
gctattgttgagggatatgattctattggttttaatgaatctttgactaaacccctttta
agagcaaaaatggagcaaaacctaaaggaaatatgtgaaggaacgcgagagaaaaatgat
gttttgactgaaaatgttaacaaatatcgtgatatgttcttagtaacccataataatttg
cagcttctgattggagggtttgcgaaatattttacttctggaacagatgatgttcataga
gtttttaacgatataattaatgttgaaaatccaaaattagttagatggtgccgtgactca
tggcctatgtatttgaagaagatacaaaataattggatcatatcatgtattaattatccg
aattgcaattatgatggtttctttttcaatagtcccaactcaataaagagcattacagtt
aacaatgaagtatgttcaatatgctcgaggaacccccttcaacctgtttattatcttact
attgtatatcgtaccaacaggatcataagaggatgttttggaggctgcgatgataatatg
gatatgctgctatcaagaagtagtggtactaataacaaacccagaaatatcgatgctgat
agtaatagtagaagaggtcgcggttccggatcagtaactcgtgggcgtagttcacgtgat
gatggcgaaaatgatatacaaggaactcgcggttctcgtggctctcgtggctctcgtgtg
agtaaaagaggaggtcgaggttcccgtggccgtgctggtcgcggttttacaagtgcacgt
ggtagtggtaggggtaggggtaggggtaggggcaggggtaggggcaggggcaggggcagt
aatgatggtagttatgataatgaaccatcttgtttatgttataagaccagtatggagagc
attctggatttcacacaagagtttgacgttgataagttagacgctactgtcaggacgttt
tacactggtgttggagaagagcaaaaaaaggcacaaacagtgcttactcagtttcaaaat
cacccagatgcctggttgaaggttgatgcaatattagacaaatctaaatttactcatacc
aagtttatcgctcttcaaatccttgaaaagctaattcaacaaaaatggaaaattctccct
ccagaacaacaagcaggaattcgaagtttcattgttaatattatcgtagctacatctgac
aatgaacaatcacttcgaaaagaaaaaacgtatttaaacaaacttaatttgattttagtc
cagattcttaaacaagaatggccccataattggccacaatttattcctgaaattgtcagc
actggtagatctaacgtaacaatatgtgaaaataatatggctatcttaaagttgttaagc
gaggaaatttttgactattctgctgaacaaatgacacagctcaagacaaagaatttaaag
acacaaatgtgtcatgaattttccaaaatattcgagctttgtaatgaagtactagaaaaa
gcgcatcagccaagtttaatcaaagcaactttagaaaccctattaaaatttttaaactgg
attcctttaggttacatttttgagacaaatattatagaaaacttacggaataggtttatg
gaatctgcagaatatcgtaatgtgacgttgaaatgtctgagtgagataggagcattaaac
gtaagccacgaatacgacgataaattcatagctttgtttaacatggttgttgcagctctc
gaatctatggtaccggtttcagcagatttcgccacgatatacaagaatagcagtaacgaa
gaacaggaatttattcagaatttggcactgttcttcacaggctttttgagtactcatctt
aagatcatggagtctcagcagaacagtcaacctcttttaaaagcccattattatctcctt
aggatctcacaggttgaagaacgagaagttttcaaagtttgcctggaatattggactaaa
ttggttgccgaattatacgaagagatacaaaatttgcccgtccttgagatgcctcttctt
tctattaccggtgtatcttctccaccttctacgcttgcgaacattcctttgagaaaacat
atgtatagtgatatcttaacaaatttaagagttattatgatcgatcgcatggtaaaacct
gaagaggtgctggtggttgagaacgatgaaggtgaaattgttcgtgaatttatgaaagac
tgtgacacgatcacattatacaaaagcatgcgagagtgtctagtatatttaacacattta
gatgttcaagattcagaaataattatgtcaaataagttaacaaaacagatcgatggttct
gaatggtcttggaacaatttgaacaagctttgttgggcaattggatccatttccggtgca
atgaatgaagacacggaaaaaaggtttttagtgacagtaattaaagaactcctaagttta
tgtgaacagaaacgcggaaaagacaacaaggctgtagttgcctcgaatatcatgtatatc
gtcggtcaatatccccgttttctcaaggctcattggaagtttttgaaaacggttgttaat
aaactttttgaattcatgcatgaaacccatgaaggtgttcaagatatggcttgtgatact
tttattaaaattgctcagaaatgccggcgtcaatttatttcacagcaacaaggagaaact
actcctttcatagacgagattataagtggcattgagacaattacaaaggatttgtctcca
cagcaggttcaaaccttttatgaagccgtgggttatatgatttcagcacagacaaataaa
actattcaagaacgtttagtaatgaattatatggaacttccaaatcaaggatgggatcgt
attttggaagatatttcaaaagatataaatgcactttatgttgccgaaaatacaaaaatt
cttggacatgtcctcagaacaaatgtagcagcatgtagtgctgtcggaagtggtttttct
gtgcagatagctagaatttatgtgacgttattggaattgtataaagcggttagtcaaatt
atatccgacaccgtggcaaatgaaggtctcattgcaacaaaaacacctcgtgtccgtaac
ttgagagtaataaaaaaagagaccttaaaattgatggaagtttatataactaaatctgaa
gaaacaagccaaatcataacacatttaatgccaccgttgttgtcagcggtccttatcgac
tacaataataatgtcgaacaggcaagagatgctgaagttttaagttcaatggcgactatt
atagcaaagttagggcccggaatcacgaatgaagttccagcaattcttaatgctgtattt
gaatgcactttgaatatgataaacaaagatttttcagaatatcctgaacatcgtgttggc
ttctttaaattgcttcgagctatcaaccagcattgctttccagcgcttttaactttgccg
tcagcacaatttaaactgataatggatagcattgtttgggcatttaaacacacaatgcga
gatatcgctgatacgggtcttaatatttgtttagaattgataaataatataagtatgcaa
gatccagctactgctaacatgttctatcagcagtatttccttactctagtggcagatgta
ttgttcgttttggcagatacagatcacaagagcggattcaaaatgcaatgcagtgttctt
caacgaatgttcaaccttgtggaaaccggtgcagtacaatctccattgtttaaccctgct
gaagttcaagatcctaacatgacgaatcaacgatttttgagagaatatgtgatgaatata
ttgcacaatgcttttcctcatttacaaagtatccaagttcaatcctttgtaatggggctt
tttgaactcaatcaagacaataccaaatttaaactacacttgcgtgattttctaatccag
ctaaaagaatttgccggtgacaatgctgatttatatcttgaagaacgcgaagcggaagca
gaacaacgaaagagaactgaaatggagaatgctttgaaaatcccaggtcttgtaaagccc
gcagatttaccaccaatggaagatgaagaataa
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integrated database retrieval system