KEGG   Rhizophagus irregularis: OCT59_004381
Entry
OCT59_004381      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K14320  aladin
Organism
rie  Rhizophagus irregularis
Pathway
rie03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    OCT59_004381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rie03019]
    OCT59_004381
Messenger RNA biogenesis [BR:rie03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     OCT59_004381
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WDR55 Beta-prop_EML Beta-prop_RSE1_2nd Beta-prop_EIPR1 eIF2A Beta-prop_WDR75_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 36866642
NCBI-ProteinID: XP_025180685
LinkDB
Position
12:3894888..3897177
AA seq 484 aa
MSLDFSQILAPSLNEVSIAEIEGKILNLGCAKDQNLTHYINSEGIVFPNLQVPYQLSHPD
LVHLGTRRVVTDLPTSPTAYGRFMDSVKHSIDEQINQAQTYIQEVTQNIKDMLPSFLNNY
IFNADTEEYMQSLRMKIDRYPAKIIDWHPYFSIFAVAHRVDVILLYDLRVEEWFPEVLEN
SLQKEITCMAWKPLGGNILAVGCRRGICLWELSLEQKKESVPTRLPAWMRHLHYPGHENI
VSLAWHPHGYSLATGSADGSVILWDTAFETGTPLTRNRKVTFLSWSPVGEFLFSSSLDGK
IEVWETQRWTSKTITSNGYPVETGCWTTDGRALFLGFDGYEGEILVLSISPNFDYEWLPK
IDLSPIPECAGIGIEQLAIDPNGERLIACFKNTQLFKDTPLLLVFDAKLPSQVSKKANLL
NFPRTMRGPAWNDPDDQGAFLTQSDPKPVSLSFAKQFTRGSLLSPVWGDGQISFIPFLYN
KANK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcgttagatttttctcaaattttagctcctagtttaaatgaagtctccatagcagaa
atcgagggaaaaattttgaatttaggatgtgccaaggatcaaaacctcacacattacata
aattccgagggtattgtgtttccaaacctgcaagtcccttatcaactttcgcatccagat
ttagttcaccttggtacacgaagagttgtaactgacctaccaacgtcacccaccgcttat
ggacgatttatggattcagttaagcattcgattgatgagcaaataaatcaagctcaaaca
tatatacaagaagtaactcaaaatattaaagatatgcttccatcattcttgaataattac
atttttaatgccgataccgaagaatatatgcaatcgcttcgtatgaaaatagatcgttat
cctgcgaaaattattgattggcatccatatttttctatatttgcagtagcccatagagtg
gatgtcattttgctatatgatttacgtgttgaagaatggtttcccgaagtcttagagaat
agtttgcaaaaggagattacatgtatggcttggaagccattaggcggaaatatcttagca
gtcggatgtcgacgtggaatttgtttatgggaactttcacttgaacagaagaaagaatcg
gtaccaacgcgtcttcccgcgtggatgcgtcaccttcattaccctggacacgaaaatatt
gtttcgttagcttggcatccacatggatactcattagcaacaggttcggcggatggttca
gtaattctttgggatacagcgtttgaaacaggaacacctttaacaagaaatcgcaaagtt
acgtttctgagctggagtcctgttggagaatttttattttcatcatcattagacggtaaa
attgaagtatgggagactcaacgatggacatccaaaacaataacttcgaatgggtatccc
gtcgagacaggatgttggacaacagatggacgtgctttattcttgggattcgacggatat
gagggtgaaattcttgtactttctatatctccaaactttgattacgaatggttacctaaa
atagatttatctccaattcctgaatgcgctggtataggaattgaacaactggcaattgat
ccgaacggcgaacgtcttattgcatgtttcaaaaatacgcaattgttcaaagatacacca
ttgttacttgtttttgatgctaagttaccatcgcaagtgtcaaagaaagccaatcttttg
aattttccaagaacgatgcgaggacccgcatggaatgatcctgacgatcaaggtgcattt
ttaacacaatctgaccccaaaccagtatccctaagctttgctaaacaatttactagagga
tctttattaagtccggtatggggagatggccaaatatcttttataccatttttatacaat
aaagctaataaataa

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