Rhizophagus irregularis: OCT59_004477
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Entry
OCT59_004477 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rie03032
]
OCT59_004477
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_004477
Enzymes [BR:
rie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OCT59_004477
DNA replication proteins [BR:
rie03032
]
Eukaryotic type
DNA Topoisomerases
OCT59_004477
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
OCT59_004477
Centrosome formation proteins
Centriole proteins
OCT59_004477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
36867702
NCBI-ProteinID:
XP_025178388
LinkDB
All DBs
Position
12:4376391..4381452
Genome browser
AA seq
1505 aa
AA seq
DB search
MSDSDYIPNKEKHTVKTTKPRKLAKPTTKDSFSDEERYTVKTTKTRKITKPSTLKDASNV
MVIDSSDEEKYGAKATKTRKPTKTTTLKETSNIMVLDSSSDEEDDEKYTVNPTKSRQQPK
QPTLTTPKNTLNVLDSDYSSDEEEYTVKPTKSRQQLKQTTLTTLKDTSNVLDSDYSLDEE
QYAVKPTKSRQQLKQTTLTAFKDTSNVLDSDYSPDEEQYTAKPTKSRQQLKQTTLTTLTT
LKDTSNVLDSDYSPDEEQYTAKPTKSRQQLKQTTLTTLTTLKDTSNVLDSDYSLDEDEYT
IKPTKIRKPTVKKASSSKAPSSKASSSKTSSSKASSSKVTSSEASYNKAASNETSSNNVT
SANSSSNGASTQSKKPVEEVYQKKTQLEHILLRPDTYVGSVQASTEKLWVYDSDKRTMVY
REITYVPGLYKIIDEILVNAADNKIRDPSMDTIKVDIDVESGKISIYNNGNGIPIEIHKE
ENVYVPELIFGHLLTSSNYNDNEKKVTGGRNGYGAKLTNIFSTEFIVETVDSSAGKKYRQ
VFKDNMSVKEPPKISSYSKKEEYTMITFKPDFQKFNMFNEFDNDIVALLKKRVYDLAGCV
RNVKVFLNGERLKIKNFKEYSQMYLSGNNDFVDLQSSIIYEEVNQRWEIAFVPSPEGTFQ
QISFVNSISTSKGGTHVNYVADQIVEKFMAAVTKKAKDVKNIKKHQIKNHMWLFINCLIE
NATFDSQTKECLTLKASSFGSKCNPSETYFNKLLKSNVIESILDDVKHKQSKELKKTDGR
KTGRIMGIAKLDDANNAGGKKCQDCTLILTEGDSAKALAVAGFSIVGRDNYGVFPLRGKL
LNVRDGTHNQIMNNAEIQHIKQILGLKQGKVYTSTGELRYGHLMIMTDQDHDGSHIKGLI
INFLDYFFPSLLKVPGFLMEFITPIVKCTRGNTKKSFFTLPEFASWLENNDNGKGWKIKY
YKGLGTSTAEEAKEYFKDLRTHKKPFKTIQEGERELIDMAFNKKKADDRKEWLRNYEPGT
YMNHNVKEITITDFINKELILFSRADNERSIPSVLDGFKPGQRKVLYTCIKNKYKNEIKV
SALAGAVLADAAYHHGDSSLQGTIIAMAHDFVGSNNISILHGVGQFGTRSQGGKDAASAR
YISIAVPKLARMLFHPQDDVLLTYCNDDGQIVEPEWYLPIIPMILVNGSEGIGTGWSTYI
PNYNPQDIVNNLKLMIDGKEPVPMHPWYRGFRGSTEQAGKDKYKVSGIIELVNNGTEVRI
TELPVRSWTQNYKEQLEQWISGTEKVPAWIIGYKENHTITNVDFTVQLTEEKLNNALEEG
LEKKFKLSTNINTSNMVCFDGKGRIKKYSSAEEILLEFYDYRLEYYFKRKDHMLKVLELE
VNQLRNKARFIQMKIEHKLEFEGFRKAEIIKLLESEGFERFRNAKEEKSDDEDQTDNGGD
GYNYLMNTKSWSFCKEEAQKLMDKKTEKEKELAILRKKSPQEIWEEDLDVFLDEWNELLN
SDRKR
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattctgactatattccaaacaaagagaaacataccgtaaaaactacaaaaccg
cgtaaactagctaaaccaacgactaaagattctttttcagatgaagaaagatatactgta
aagactacaaaaacgcgtaaaataactaaaccatcgactcttaaagacgcttcgaatgta
atggtaatagattcttcagacgaagagaaatatggcgcaaaggctacaaaaacgcgtaaa
ccaactaaaacaacgacccttaaagaaacttctaatataatggtattagactcctcctca
gacgaagaagacgatgagaaatatactgtaaaccctacaaaatcgcgtcaacaacctaaa
caaccgactctcacgacccctaaaaacactttaaatgtattagattctgactattcttca
gatgaggaggaatataccgtaaaacctacaaaatcgcgtcaacaacttaaacaaacgacc
ctcacgacacttaaagacacttcaaatgtattagattctgactactctttagatgaagag
caatatgccgtaaaacctacaaaatcgcgtcaacaacttaaacaaacgaccctcacggcc
tttaaagacacttcaaatgtattagattctgactattctccggatgaagagcaatatacc
gcaaaacctacaaaatcgcgtcaacaacttaagcaaacgaccctcacgaccctcacgacc
cttaaagacacttcaaatgtattagattctgactattctccggatgaagagcaatatacc
gcaaaacctacaaaatcgcgtcaacaacttaagcaaacgaccctcacgaccctcacgacc
cttaaagacacttcaaatgtattagattctgactattctctagatgaagatgaatatacc
ataaaacctacgaaaattcgtaaaccaactgttaaaaaagcttcttcaagtaaggctcct
tctagcaaagcctcttctagtaagacttcttcaagcaaagcttcttcaagcaaagtcact
tctagcgaagcctcctataacaaagctgcctccaacgaaacctcttctaataatgtcact
tcagctaattcttcatcaaatggagcttcgactcaatcaaaaaaaccagtagaagaagtt
tatcaaaagaaaacacaacttgaacatattttattaagacctgatacttatgttgggtca
gttcaagcgtcaactgaaaaattatgggtttacgactcggataaacgaacaatggtctac
agagaaattacttatgttccaggtttatataaaattatagatgaaatcttagtaaatgct
gctgacaacaaaattcgtgatccctctatggacaccataaaagttgatattgatgtggaa
tctggcaagatttctatatataataatggtaatggtatacccatcgaaattcacaaagaa
gaaaatgtgtacgtaccagaacttatatttggccatcttttaacatcttctaattataat
gataatgaaaagaaagttactgggggtcgaaatggttatggcgccaaattgactaacatt
tttagcacagaatttattgttgaaactgttgatagttctgcaggcaaaaaatatcgccaa
gtattcaaagataacatgtctgtaaaggaacctccaaagatttcatcttactcaaaaaaa
gaggaatatacgatgatcactttcaagccagattttcagaaatttaatatgttcaatgag
tttgataatgatattgtagcactcttgaagaaacgtgtatatgatttggctggatgtgta
agaaatgttaaagtcttcttgaatggggaaagattgaaaattaaaaattttaaagaatat
tcccagatgtatttgagtggaaacaacgattttgtcgatttacaatcatcaattatttac
gaagaagtaaatcaaagatgggaaattgcatttgtaccatctcctgaaggaacatttcag
caaattagtttcgtcaatagtattagtacctctaagggaggtactcatgttaattacgtc
gcagaccagattgtagagaaatttatggcagcagtcacgaaaaaagctaaggacgtaaaa
aatattaaaaaacatcaaatcaaaaatcatatgtggctttttattaattgtttgattgaa
aacgcgaccttcgattctcaaacaaaagaatgtctaacattgaaagcttcatcgtttggt
tcaaaatgtaatccgagcgaaacatactttaataaattacttaaaagcaacgtaattgaa
agtatattggatgatgtcaaacacaaacaaagcaaggaactaaagaaaaccgatggtaga
aagacaggtagaatcatgggtattgctaaactggatgatgcaaataatgccggcggtaaa
aaatgtcaagattgtactttaatccttactgaaggcgattctgcaaaggctttggcagtt
gccggattttctatagttggtcgtgacaattatggagttttcccgcttcgtgggaaatta
ttaaatgttagggatggtacacataaccagattatgaataatgcggaaatacaacatata
aaacaaattctcggactgaaacaaggaaaagtgtatacttcaacaggagaattacgttac
ggtcatctcatgataatgactgatcaagatcacgatggaagccatataaaaggattaatt
atcaacttcttggattatttctttccgtcattgcttaaagttccaggtttcctaatggaa
ttcataacgcctattgtaaagtgtacaagaggtaacactaaaaaatcgttctttactttg
ccggaattcgctagttggttggaaaataatgataacggtaaaggctggaaaattaagtat
tacaaaggtctcggtacgagtactgctgaagaagctaaagaatattttaaagatctaaga
acacataaaaaaccattcaaaacaattcaagaaggtgaacgtgaattgattgacatggct
ttcaacaagaagaaagccgatgatcggaaggaatggttaagaaattatgaacctggaact
tacatgaatcacaatgttaaagaaatcacgataactgattttataaacaaagaattgata
ttattcagtcgagctgataacgaaaggtctataccgagtgtccttgatggttttaaacct
ggccaaaggaaagttctttacacttgtattaagaataaatataagaatgaaataaaagtc
tcggcattagctggtgcagttctagctgatgcagcatatcatcatggtgattctagtctt
caaggtactatcattgcaatggctcatgattttgtcggttcaaacaatatcagcattctt
cacggagtgggtcaatttggtacaagaagtcaaggtggtaaagatgcagctagtgcacgt
tatattagcattgcagttcccaaattggctagaatgttatttcaccctcaagacgacgtt
ttacttacctattgtaacgatgatggtcaaatcgttgaacctgaatggtatttacctatt
atacccatgattctcgttaatggttcagagggtatcggaaccggttggagtacatatatt
ccaaattataatccacaagatatcgtcaataacttgaaactaatgattgatggtaaagaa
ccagttcccatgcacccttggtaccgtggttttcggggtagtactgaacaggcaggcaaa
gacaaatataaagttagcggtataatcgagctggtaaataacggaacagaagttaggatt
accgaattgcctgttcgttcttggacacaaaattataaagaacaactggaacaatggatt
tcgggaacagaaaaagtacccgcttggataattggatacaaagagaatcacacgataact
aacgtcgattttacggttcaattaaccgaagaaaaattaaataacgctttagaagaagga
cttgaaaagaagttcaaacttagtactaacataaacacttcaaacatggtatgctttgat
ggaaaaggaagaattaaaaaatatagttcagctgaagagattctcctagagttctatgat
tacagactagagtattattttaaaagaaaggatcatatgctgaaggtattagaactcgaa
gttaatcaactcagaaataaggccagatttattcaaatgaagatagaacataagctcgaa
tttgaagggtttcgtaaagcagaaatcattaagttactcgagtctgaagggtttgaaaga
tttagaaatgccaaggaagagaaaagtgatgatgaagatcaaaccgacaatggtggtgat
ggatataattatttaatgaatactaaatcctggagtttttgtaaggaagaagcacaaaaa
ctcatggacaaaaaaaccgagaaagaaaaggaacttgctatacttcgaaagaaatctcca
caagaaatttgggaagaagatctagatgtgtttttggatgaatggaacgaattattaaac
agtgatcgcaaaagatag
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