Rhizophagus irregularis: OCT59_004681 Help Entry OCT59_004681      CDS       T10295                                  Name (RefSeq) uncharacterized protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism rie  Rhizophagus irregularis Pathway rie03040   Spliceosome rie04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:rie00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     OCT59_004681   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     OCT59_004681  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:rie03041]     OCT59_004681    04121 Ubiquitin system [BR:rie04121]     OCT59_004681    03400 DNA repair and recombination proteins [BR:rie03400]     OCT59_004681 Enzymes [BR:rie01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      OCT59_004681 Spliceosome [BR:rie03041]  Complex B   Other components    Prp19 complex     OCT59_004681  Complex C    Prp19-CDC5 complex     OCT59_004681 Ubiquitin system [BR:rie04121]  Ubiquitin ligases (E3)   U-box type E3    OCT59_004681 DNA repair and recombination proteins [BR:rie03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     OCT59_004681 SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Prp19 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_2nd DSE1_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_DCAF12 RMC1_N Tricorn_2nd zf-Nse Rtf2 Beta-prop_WDR35_TULP_N zf-NOSIP CENP-H Motif Other DBs NCBI-GeneID:  36872864 NCBI-ProteinID:  XP_025165957 LinkDB All DBs Position 13:155572..157840 Genome browser AA seq 506 aa AA seqDB search MFCAISGEPPQEPVVSKKSGQVYEKRLILKYIADYGKDPITGEDTKEDDLLEIKASPKTV KPRPATLTSIPSLLSVFQNEWDSLMLETFTLKQQYQQVRQELSQALYQHDAACRVIARLM KERDAAREALASVQAHIAIKPPPEAVASESQNMEIEEQERGINEVVINKLNETSAVLSKN RKKRKPPPELTSPDTIRTFTQNFSIGSLHTSTTPGITSMDVDQTEQLILTGGNDKKALIL NKEEGKVTSQLKGHTKKITDVLWLGNPNEEGYDTAFTASVDKTIRIWQKTDKDYKTKSTI SAHTAEVTGISVHATKDYLVSVSNDSTWAFHDIHTAQTLVKTESNDVTNGYSTVEIHPDG LILGTGTNDSIVRIWDIKTQKNVTSFTDHTGRITSIAFSENGYYLATACEYNAVKLWDLR KLLNFHTIQLDEGAKVNKVCWDYSGQYLGVCGTDVRIYQAKSWNQLAVFTDNTAEATDMK FGELGKSVYVSGLDRTLRFYGEPTEE NT seq 1521 nt NT seq  +upstreamnt  +downstreamnt atgttttgtgcaatttccggagaacctccacaggaacccgtagtttcgaaaaaatcggga caagtttatgaaaaaagattgatcttaaaatacattgctgactatggtaaagatccaatt accggggaagatacaaaggaagatgatttattagaaataaaagcaagtccaaagaccgta aagccaagacctgctactttgacatcaattccatctcttttgtcagtctttcaaaatgaa tgggatagtttgatgttagaaacttttactcttaaacaacaatatcaacaagttcgacaa gaattaagtcaggctttatatcagcacgatgctgcttgtcgagttatcgctagactaatg aaagaaagagatgctgctagagaagccttagcaagcgtacaagcacatattgctataaaa cctcctccggaagcggttgcttcagaaagtcaaaatatggaaatcgaggaacaagaaaga ggcatcaatgaagttgttattaataaactaaatgaaactagtgctgtactatcgaaaaat cgtaagaaaagaaaaccacccccagaacttacttcacctgatacaattagaacctttaca caaaatttttcaatcggttctttgcatacttcaactacacctggaataacgtctatggat gttgatcaaacagaacaactaattcttacaggcggtaatgataaaaaggcgcttatattg aataaagaggaaggtaaagtcaccagtcaattaaaggggcatacaaaaaagattacagat gtattatggcttggaaatcctaatgaagaaggttatgatactgcatttaccgcgagtgtt gataaaactatcagaatatggcaaaagactgataaagattacaagactaagtctactatt tcagcgcataccgctgaagtcacaggtatctcagtgcatgctactaaagattatttggta tctgtgtcaaacgattcaacatgggcttttcatgatattcacactgcccaaacgttagta aagactgaatcaaatgatgtgacaaatggttattcgactgtagaaattcatcctgatgga cttatcctgggaactggaacaaatgattctatagttcgaatttgggatatcaaaacgcaa aagaatgtcacatcatttactgatcatactgggcgtatcacttcgatcgcattctcagaa aatggctattatttagcaacggcatgtgaatataatgcagtcaaattatgggatttaaga aagttgttaaactttcatactatacaacttgatgagggagcaaaagttaataaagtatgc tgggattacagtggtcaatatttaggtgtttgtggaacagatgttagaatttatcaagca aaatcatggaatcagttggcagtttttacagataatactgctgaagctacagatatgaaa tttggtgaattgggaaaatctgtatatgttagtggtttagatcgtactttaagattttac ggtgagcctacggaggaataa

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