Rhizophagus irregularis: OCT59_005111
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Entry
OCT59_005111 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rie Rhizophagus irregularis
Pathway
rie03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OCT59_005111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_005111
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
OCT59_005111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_2
BHD_1
Transglut_core
Papo_T_antigen
MeaB
Motif
Other DBs
NCBI-GeneID:
36870735
NCBI-ProteinID:
XP_025171328
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Position
13:complement(2455553..2459538)
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AA seq
938 aa
AA seq
DB search
MSLRRSARIANKNRPNESVEQLVETSKRKAKAKKSVEITAVPPSGKSTSIDNISNFVEEE
MTGVLITPVETFIDKGKTKDNFLSLVDNTSINKGKSKEIFQHSDGSKSIFEPIDSFWLRK
RKSAIKHNESSDIESLENQEFQDNPVHYINEDNDSDDWEEIDLSTCQDQLDDLSESKPLP
NKTIQITFEKPKIQYKARGITKIERAIRQNVHKAHLLALLAHGMIRNKWCNDEMTQAIAL
SLIEYDLQALFDKALVKVDVKHANILIIALQDLCKWWKNYFVITKPGIRNRAYHEFGENN
EGKIAEDDESFSDCLTSINVFRRSISVGEGSRDTSAQLFVAVLRSLGIPARLVCSLQAVS
FKLARKNEAYTTRKKDNDLDYKGSTSSSMNDEAQRTLGLGKYKLGAKGKNRSSSKSKREQ
SDDDDDYSSPSKQSRVDRLRKSCSVLKNSLKKDNSNGLQNSNAPPIFWCEVYFAAYKKWF
CIDPVRALVNSPQAMEPASNDMDNVMAYIVAFEQDGYIKDVTRRYASQWGARTRKLRVPV
TKDGYDWWHETLSYFARPYERKQDNEEDAHLHKLEVSERMPTSISAFHNHPLYALERHLK
KFEIIHPKQPIIGNIRGEPIYPRKNVKQLHTAETWLREGRQVMIGEQPLKHVKSRIYTLA
KRRAANMASLYDEEPPESGLYGEWQTEEYIPEPIIDGKVPKNSYGNVNMFKESMCPIGGV
HIPINGIGKIAKKFGVDYGDAVVGFDFQARRCVPVIHGIVVAKEHETMLLEAWHEYASHV
EAMNDAKREREVLTRWRRLIMGVQIRMRLYNDYVKQDSSDMEEGESEFYHGESEGESELY
HGDTEEEDNNYLVNVVNKSGSNKLHETIGEKTIIESNNDKSNTNFSDNMDIEDDFVRIEE
NDTSTEGSITWDDKDEEMYTEDKNEAINIEGGFIREKE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgaagatcagcacgtatcgctaataagaataggcccaatgagagtgttgag
caacttgttgagacttcaaaaagaaaagcaaaagcaaaaaaaagtgttgaaatcactgct
gtgccaccttctggaaaaagcacctcaattgataacattagtaattttgtcgaagaagaa
atgacgggtgtacttataactcctgtcgaaacgtttattgataagggaaagacaaaagat
aattttttatcattagtcgataatacttctattaataaaggcaagtcaaaggaaattttt
caacattccgatggctctaaaagcatttttgagcccattgactctttctggttgcgaaaa
agaaaatcagcgattaaacacaatgagtcgagtgatattgagtctctggagaaccaagaa
tttcaagataatccagttcattatataaatgaagataatgatagtgatgattgggaagaa
atagacctttctacatgtcaagatcaacttgatgatctttctgagtctaagccactcccg
aataaaactattcaaattacttttgagaagcctaagatacaatacaaagctcgaggtatc
actaaaattgagcgagctattcgacaaaatgtacacaaagcccacttgttagccctactc
gcccatggtatgattaggaataaatggtgtaatgatgaaatgacacaggcaatagcactc
tctttaattgagtatgacctacaagcgctttttgacaaggctttggtaaaagttgacgtc
aaacacgctaacatactaattatagccttacaagatttgtgtaaatggtggaagaattat
tttgtaattacaaaacctggaattcgaaatagagcatatcatgaatttggagagaacaat
gaggggaagattgccgaggatgatgaatcattttctgattgtttaacatctatcaatgta
tttcggaggagtattagtgttggtgaaggaagtcgtgatacttctgcacagttatttgtt
gctgtgttacgttccttaggaatacctgcacgattagtatgttctttacaagcagtatca
tttaaattagcacgtaaaaacgaggcatatactactcggaaaaaggataatgatttagat
tacaagggttcaacaagtagtagcatgaatgatgaagcccagagaacacttggacttgga
aaatataaacttggtgcaaaagggaagaatcgtagtagcagtaaatcaaagagagagcaa
agtgatgacgacgatgattatagttctccatctaaacaatctcgtgttgatcgcttgcgt
aagtcatgtagtgtattaaaaaacagtcttaagaaagataatagtaatggcttgcaaaat
tcaaatgcgccgccaatattctggtgtgaggtttattttgcagcttataaaaaatggttt
tgtatagatccagttcgtgcattggtgaattcaccacaagcaatggaacctgcgtctaat
gacatggataatgttatggcttacatagttgcatttgaacaagatggttatataaaagat
gtgacgcgtcgatatgcttcacaatggggagcacggacgcgaaaattaagagtgcctgtc
accaaggacggttatgattggtggcatgaaacattgtcttatttcgcacgtccgtatgaa
aggaaacaagataatgaagaagatgctcatttacataaattggaagtttctgaacgtatg
ccaacttctattagtgctttccacaaccatcctttgtatgctcttgaacgtcatttgaag
aagtttgaaataattcatccaaagcaaccaataatagggaatattcgtggtgaaccaata
tatccacgcaagaatgttaaacaattacatacagctgaaacttggttaagagaaggtcga
caagttatgataggtgaacaacctttaaagcacgtgaaatcgcgtatatatactttggca
aaacgtcgtgcagcaaatatggcttcattatatgacgaagagccccccgagtctggttta
tatggcgaatggcaaaccgaagaatatatacctgaaccgataattgacggtaaggtacca
aagaactcttatggtaatgtaaatatgtttaaggaaagcatgtgtccaattggaggtgtg
catattccaattaatggaattggaaaaattgcaaagaaatttggtgtcgactacggagat
gctgtggttggctttgatttccaagctcgtcgatgtgttccagtaattcatggaattgta
gttgcgaaggaacatgaaacaatgttacttgaggcatggcatgaatatgcaagtcacgtt
gaagcaatgaatgatgcaaagcgagaaagagaagttttgacaagatggaggagactaatt
atgggagtgcaaattcgaatgagattatataatgattatgtaaaacaggattcatctgat
atggaagaaggagaaagtgaattttaccatggtgaatcggaaggagagagtgaattgtat
cacggcgatactgaagaagaagataataattatttggtcaacgttgtcaacaagagtgga
tcgaataaactacatgaaactattggggaaaagaccattattgaaagtaacaacgataaa
tccaatactaatttttcagataatatggatattgaagatgattttgtacgaatagaagag
aacgatacaagtacagagggtagtattacgtgggatgataaggatgaagaaatgtatacg
gaagataaaaatgaagctattaatatagaaggtggctttatacgtgagaaagaataa
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