Rhizophagus irregularis: OCT59_005116 Help Entry OCT59_005116      CDS       T10295                                  Name (RefSeq) uncharacterized protein   KO K12830   splicing factor 3B subunit 3 Organism rie  Rhizophagus irregularis Pathway rie03040   Spliceosome Brite KEGG Orthology (KO) [BR:rie00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     OCT59_005116  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rie03021]     OCT59_005116    03041 Spliceosome [BR:rie03041]     OCT59_005116    03036 Chromosome and associated proteins [BR:rie03036]     OCT59_005116 Transcription machinery [BR:rie03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      OCT59_005116 Spliceosome [BR:rie03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     OCT59_005116  Complex B     OCT59_005116  Complex C    U2 SnRNP specific factors     OCT59_005116 Chromosome and associated proteins [BR:rie03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      OCT59_005116     TFTC complex      OCT59_005116 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML_2 WDR55 Beta-prop_BBS7 WD40_WDHD1_1st Motif Other DBs NCBI-GeneID:  36870731 NCBI-ProteinID:  XP_065997345 LinkDB All DBs Position 13:2474895..2480177 Genome browser AA seq 1171 aa AA seqDB search MFLYNLTLQPPTTINVAVVGHFSGTKQQEIVISRVTRLELLKADPNSGKLQTLLTHDAFG IIRSLTPFRLTGGSKDYIIVGSDSGRIVILEYNIVKNKFEKVHQETFGKSGCRRIVPGQY LAVDPKGRSVMIGAIEKQKLVYILNRDSAANLTISSPLEAHKSHTLVHHCIGLDVGYENP VFACLEVDYSDADMDPSGDAFNSTEKMLTYYELDLGLNHVVRKWSDPVDARANLLFPVPG GNDGPSGVLVCSENFITYKHQRVPELRVPIPRRRNPLEDPSRGLIIVAGVMHKMKGVFFF LLQSEEGDIYKVTLDYEDDKLRNSEISIRLYSFTSLGDDNDEPEWSSDEFMDSDTDISAY FTPRDLQNLERADELESLNPLIDAKVLNLTDDDTPQLYALCGRGAGSTFRILRHGLEISE MAVSELPGNPNAVWTTKLKSDDEFDAYIIVSFVNATLVLSIGETVEEVTDTGFLATTPTL DVHQLGDDALLQIYPQGIRHIRADRRVNEWKTPGNRAIVKAATNKRQVVIALTGGELVYF ELDNQGQLNEYQERKEMSSNVTCLSVGEVPEGRQRSRFLAVGCDDNAVRILSLDPDNTLE VLSTQGLSAPPQSLSIIEMMDIGTDASHGTLYLNIGLQNGVLLRTMLDTITGSLTDTRQR FLGARPVKLFRVTIQGAPAVLALSSRPWLSYTFQSRLHLTPLSYDMLEYGSNFTSPQVPE GIVAISANTLRIFAVEKLGTVFNQAIIQLSYTPRHFVLHPPSRNFVVIESEHNTYSPMEK QRTLDAKISEGKRFDPSLLDLSPEVFGLPKAEPGKWASCIRIINPFLGDTTSKIEFEENE AAFSITMVNFHSHNNELFLVVGTAKDANLAPRTCSSGYLYVYQFNEDGNDLNLLHKTQCD DIPLALLPFQGKLLAGVGKALRIYDIGKRKLLRKCETKAIPNCIVNLHTQGNRIIVCDMQ ESIHYASYRQHDNRIIIFADDTTPRWITTTTMIDYDTLAGGDKFGNFFIDRLPSETSEEV DEDPTGNKIMYEKGYLMGAPHKVSMISHYHVGDILTSIHRTTLVAGGREILVYTGIMGNI GVFVPFLTREDIDFFQTLEMHMRNEAPPLAGRDHLQYRSFYAPVKSVVDGDLCEQYNLLP MEKKRMIADELDRTPAEIQKKIEDMRVMAAF NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgtttctttataatttaactttacaacctccaactaccataaatgttgctgtggttggc catttttcaggtacaaaacaacaagaaatcgttatttccagagtaactcgtttggaacta ttaaaagctgatccaaattcgggtaaattacaaacgcttttaactcacgatgcttttgga ataataagatcgttgacgccatttaggttaacaggaggttcaaaagattatattatagtc ggttcagattcagggcgtatagtcattttagaatacaatattgtaaaaaataaattcgaa aaagttcatcaagaaacttttggtaaatcaggatgcagaagaattgttcctggtcaatat ttagcagtagatccaaaaggcagatctgttatgataggtgctattgaaaaacaaaaattg gtttatatccttaaccgtgactcggcggctaatttgacaatatcttcaccactggaggcc cataagtcgcatacattagttcaccattgtataggcttagatgttggatacgaaaatcct gtatttgcgtgcctagaagtagattattctgatgctgatatggatccatcaggcgatgcg ttcaatagtactgaaaagatgctaacatattatgaattagatcttggtctaaatcatgta gtgagaaaatggagtgatcctgttgacgctcgagcaaatttactttttccagttcccggt ggaaatgatggtccatcaggagtgttagtttgttcggagaattttataacatataagcat caacgtgtacctgaacttcgagtacctataccacgtcgcagaaatcctcttgaggatcct tcacgtggattaattattgtagcaggtgttatgcataaaatgaaaggtgtattcttcttt ttattacaaagtgaagaaggtgatatatataaagttacacttgattacgaggatgataag ctgcggaattcggaaatcagtattcgactctattcattcacaagtcttggtgatgataat gatgaacctgaatggtctagcgatgagtttatggattccgatactgatatttcagcatat tttacaccgcgtgaccttcaaaacttggaacgggctgatgaattggagagtttaaatcca ttaatcgatgctaaagtcctaaatctcacggatgatgatacaccccaattatatgctttg tgtggaagaggtgctgggtcaacatttcgtattttaagacatggtctagaaatttctgaa atggccgtttctgaattaccaggaaatcctaatgcagtatggacaacaaaattaaagtca gatgatgaatttgatgcttatattatagtatcgtttgtaaatgctacacttgtgttatct attggcgagacagtagaagaagtaactgatactggttttcttgccacaacacctacatta gacgtacatcaacttggtgatgatgctttactacagatatatccacaaggcattcgacat attcgtgctgatcgtcgtgttaatgaatggaaaacccctgggaatagagcgatcgtaaag gcagcaacaaataaacgtcaggttgtgatagcactaactggaggcgagcttgtatacttt gaattagacaatcaaggtcaattaaatgaatatcaagaacgtaaagaaatgtcatctaat gtaacatgtttaagtgttggtgaagtacccgaaggaagacaaagatcaagatttttggct gtaggttgtgatgataatgctgtaaggattctttcccttgatcctgacaatacattagaa gtacttagtactcagggtcttagtgctcctccacaatctttatctattattgagatgatg gatattggtactgacgcatctcatggaacattataccttaacataggattacaaaatggt gttttattgagaactatgctagataccataactggttcattgacagacacacgacagaga tttctcggtgctcgtcctgtaaaacttttccgggttacaatacaaggggctccagcagtc ttagctctttcaagtagaccttggttaagttatacttttcaatctcggttacatttaaca cctctttcatatgatatgcttgaatatggttccaactttacttcgcctcaagtacctgaa gggatcgtagctatttcggcaaatacattgaggatttttgccgttgaaaaactaggaaca gtatttaatcaggctataatacaacttagttatacaccacgtcactttgttcttcatcca ccttcaagaaattttgttgtgattgagagtgaacataatacttattctccgatggaaaaa caaagaactttagatgcaaagattagtgaaggaaagagatttgatccgagtttactggat ttatcaccagaagtattcggattacctaaagccgaacctggaaaatgggcttcatgtatt cgtatcatcaatccattcttaggcgatactacgtcaaaaattgagtttgaagaaaatgaa gctgcatttagcatcacaatggttaatttccatagtcataataatgagttgttccttgtt gtgggaactgcaaaagatgcaaatctggcaccccgtacatgttcatcaggatatttatat gtatatcaatttaatgaagatgggaatgacctaaaccttcttcataagactcaatgtgat gatattccactagcgttattacccttccaaggaaagcttttagctggtgttggcaaagca ttgagaatatatgatataggaaaaagaaaattgttacgaaaatgtgaaacaaaggcaatc ccaaattgtatagtgaatttacatacgcaaggcaatcgcataattgtttgtgatatgcaa gagtcaatacattatgcatcatataggcaacatgataatagaattatcatttttgccgat gatactactccacgatggattacgaccactacaatgatagattatgatacattagctggt ggtgataaatttggaaatttttttattgatcgacttccatcagagacaagtgaagaggtt gatgaggatcctactggaaataaaataatgtatgaaaaaggatatttaatgggtgcccct cataaggtatcaatgatatcacattaccatgttggtgatattctcacatcaattcatcga acaactcttgttgcgggaggacgtgaaattcttgtatatactggcattatgggtaatatt ggagtatttgttccatttttaactagagaagatattgattttttccaaacacttgaaatg catatgagaaatgaagcacctccattagcaggacgtgatcatctacaatatcgtagtttt tatgcacctgttaaaagtgtggtagatggtgatttatgtgaacaatataatttattacct atggaaaagaaaagaatgattgccgatgaattagatagaactccggcagaaattcaaaag aaaattgaagatatgagagttatggcagcattttaa

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