Rhizophagus irregularis: OCT59_005357
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Entry
OCT59_005357 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11652
actin-like protein 6B
Organism
rie Rhizophagus irregularis
Pathway
rie03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
OCT59_005357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_005357
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_005357
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
OCT59_005357
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
OCT59_005357
PBAF complex
OCT59_005357
GBAF(ncBAF) complex
OCT59_005357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Motif
Other DBs
NCBI-GeneID:
36864261
NCBI-ProteinID:
XP_025186288
LinkDB
All DBs
Position
13:3589344..3591453
Genome browser
AA seq
442 aa
AA seq
DB search
MSTYGGDEVSAIVLDVGSCWTRAGYAGEDTPKAVFPTSYGYIEEEKEIPPDPDTQMEDVI
PTSENKPVKSVEKRYIIGDTGVAAWRENMEIKNPLVDGLIQDWDALEKIWDYAFDKSLRI
DPKEHPIFVTECAWNTRDIRERLTELAFEKYNSLAFYVAKNPVLSAFAAGRPTAVVMDCG
ASSTSCVPVVDGYVLKKGIYKQPIAGDFLSEQLLQLLQQKFDINVVPHYMIAKKTSVDPD
QPANVEFKERPNTTGSYHKFMQMRIMQEFKESVCQVSEVTYNHSSINTRPMKYFEFPDGF
NTSNGSLRFSVPEILFDPRFITQPQDGPNFDTSALLGIPQMIHQSIGVCDIDVRPNLLNN
IILTGATTLLPGFADRVNHELSSMNPGPKIKLYAAGNTIERKCSSWLGGSILSSLGTFHQ
LWISRKEYDDYGRGIVEKKCDN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatatggcggagacgaagtttcggctatcgttttagatgttggttcgtgttgg
accagagccggctatgctggtgaagatactccaaaggccgtttttccaacttcatatgga
tacattgaagaggaaaaggaaattccccctgatccggatactcaaatggaagatgtgatt
cctacttctgaaaataaacccgttaagagcgttgagaaaagatacataataggggataca
ggagtagcagcatggagagagaatatggaaatcaaaaatcctcttgttgatggattaatt
caagattgggacgcgttagaaaagatttgggattatgcatttgataaaagcctaagaatt
gatccaaaggagcatccaatatttgtaactgaatgtgcttggaatactagagatattagg
gagagacttactgaacttgcatttgagaaatacaattctttagcattttatgttgcaaag
aacccagtattatcagcatttgcagctggtcgcccaactgctgttgttatggattgtgga
gcaagtagtacgagctgtgtaccagtggttgatggctatgttcttaaaaaaggcatttac
aaacaaccaattgctggtgacttcttatctgaacaacttttacaactactacaacagaaa
tttgatatcaacgtcgtaccacattatatgattgcaaagaaaactagtgtagatcctgac
caacctgcaaacgtcgaatttaaagaacggccaaatacaacaggcagttatcacaagttc
atgcaaatgaggataatgcaagaattcaaggaatcggtgtgtcaagtatctgaagttaca
tataatcattcatcgattaatacacggccaatgaaatactttgaatttcctgacggattt
aatacatcgaacggttctctacgttttagtgtgccagagattttatttgatccaagattc
ataacgcagcctcaggatggacctaattttgatacttctgcgttattaggaatacctcaa
atgattcatcaaagtattggcgtctgtgatattgatgttcgaccgaatttattaaataat
attatcttaactggagctacaacgttattacctggtttcgctgatcgtgtaaatcatgaa
ttatccagtatgaatccggggccgaaaatcaaactttatgcagcgggtaataccattgaa
cgcaaatgtagtagttggttaggtggatccatcctttcatcattgggaacgttccatcaa
ttatggatttcgcgaaaagaatatgacgattacgggagaggaatagtagaaaaaaaatgc
gataactga
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