Rhizophagus irregularis: OCT59_005567
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Entry
OCT59_005567 CDS
T10295
Name
(RefSeq) translation initiation factor eIF3 subunit
KO
K03246
translation initiation factor 3 subunit I
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rie03012
]
OCT59_005567
Translation factors [BR:
rie03012
]
Eukaryotic type
Initiation factors
eIF-3
OCT59_005567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
WD40_like
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_HPS5
Ge1_WD40
PEP5_VPS11_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
36872829
NCBI-ProteinID:
XP_025166043
LinkDB
All DBs
Position
13:4354666..4356166
Genome browser
AA seq
327 aa
AA seq
DB search
MRPILLQGHTRSLTQIKYNYEGDLLFSVAKDQVVNVWYSHNGERLGTYHGHVGAIWTVDV
NSTSSILLTGSADNSAKLWEVRTGKCLHTWEFKTAVKRVAFSEDDSMALVVTENRMGYPG
TVTVFSVKNDIDAEQSDEPTMIINQEGSKAMVAAWGYLNKYIITGHENGEISQYDWKTGE
KIKSIHPHTDVISDLQMSEDRTYFITSSKDKSAQIFESNTLNPLKKYATDAPLNSASITP
IQDFVILGGGQEAMEVTLTKLRHGKFECRFWHKILEEEVGRVKGHFGPINTIAVHPNGKG
FSSGGEDGYVRVHHFDEDYFKFKYPEL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagacctattcttttacaaggacatactcgttccctcacgcaaatcaaatataattat
gaaggagatcttcttttctctgtagcaaaggatcaagtagtgaacgtttggtattcacat
aatggcgaacgattgggaacttatcatggtcatgttggtgcaatatggacggttgatgtt
aattcaacaagttccatcttattaactggatcagcagataactctgcaaaactgtgggaa
gttaggactggtaaatgcttacatacttgggaattcaaaactgcagttaaacgcgttgct
ttttctgaagatgatagtatggctctcgtcgtaaccgaaaatcgtatgggatatccagga
accgtaactgttttttcagttaaaaacgatattgatgcagaacaatctgatgaaccaact
atgattataaatcaggaaggttcgaaagccatggttgctgcgtggggatatctcaacaaa
tacataataactggccatgaaaatggtgaaatttctcaatatgattggaagacgggtgaa
aagattaaatcgattcatccgcatacagatgtgatttccgatctccagatgtcagaagat
cgcacatatttcattacatcctcgaaagataaatcagcacaaatttttgaatcaaataca
cttaatcctttaaagaaatatgctactgatgctcctctgaattcagcatctataactccg
attcaagattttgtcattttaggaggtggtcaagaagctatggaagttacactcactaaa
ttgagacatggtaaatttgaatgtcgattttggcataaaattttagaggaagaagtggga
cgtgtaaagggtcattttggtcctatcaatacaattgccgtccatccgaatggtaaaggt
ttttcctctggtggggaagatggctatgttcgagttcaccattttgatgaagattatttt
aaattcaaatatcccgaattataa
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