Rhizophagus irregularis: OCT59_005575
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Entry
OCT59_005575 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
rie Rhizophagus irregularis
Pathway
rie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OCT59_005575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_005575
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OCT59_005575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
DUF948
Motif
Other DBs
NCBI-GeneID:
36872835
NCBI-ProteinID:
XP_025166051
LinkDB
All DBs
Position
13:complement(4367875..>4373246)
Genome browser
AA seq
1183 aa
AA seq
DB search
MPISNKVQSKLNSVQNKRKTSTPVATQSSLLSFLKKEVPVEANNERKASEKLELPLTPVT
PKSRREKNMQNIDNEQVNNVETTSIAEITEESTSGERVLRRRVKRKIYVSSDDDDSNDKH
DSTDPPSKKPHTNIDDDYVDNCEQKESDDFDMNDEAASEDDSEDNSMAKSYQKNRNKNSN
IVQFKLKGFSSSSSSRRGSSFSSSAHMTNTEKKKQRAVDFKAKNEERYSWLQNVCDVDGN
LEGSPNYDPRTLYVPKSAKFTPFEKQYWEIKSNHWDTVVFFKKGKFYELYERDADIGHTE
FDLKLTDRVNMRMVGVPESSFEYWAAKFIAKGHKVARVDQMETALGKEMREKASKNKEEK
VIRRQLTSILTAGTIVDGGLLTDEMSTYCMSIKEHCPNEIDPPSYGVCFVDTATGEFNLA
SFVDDIDRTQFETLIMQVKPKEIVYEKGMLSKRSQRILKTCINCPIWTGLIPEREFWDAN
ATWDEIRFSRYFSNKPKNSSDQDDVINEDNDNEYKPETWPEAIKISRNKPLMLSALGGLI
WYLRSLKLDEELVSLRNFRIYDPICHSTSLILDGQTLANLEIFENNLNGSDQGTVFKLLN
HCITPFGKRTFKQWLCHPLRNVDDINERLDAIEELNKHPGFRELYDETFLHFPDLERLIS
RIHAGTCRVKDFLLVLTSFEKLMDTVDKFKEYAKQFYSGKLLKLIGSVPDLSPMLLYFKE
AFDHDQAEKEGKLLPYPGIEQDYDEINQKLCTVEKQLDDYLKETKKLLKSDKIVYKDIGK
EIYQLEVPNGIKVPNDWKKLSCTRKVNRYWNSTLQKFIRDLQESLETKSNILKSLQGRFY
EKFDAHYQKTLSAVKIISEIDCLLSLAASSKALGEPSCRPQFAQDGPSVLEFEELRHPCV
TPSIATDFIPNDTYLGGDNQNIILLTGPNMGGKSTFLRQNCVAIIMAQLGCCVPAKKCRL
TPFDRIYTRIGANDNILAGQSTFMVELNETSKILHEATPRSMVILDELGRGTSTFDGYAI
AYSVLHYLATHIGCLGLFSTHYGMLTQEFDKNPNVALKHMSCQVDQHKKEVTFLYKLVPG
VCPKSYGMNVANMAGVPREIVDRAEVTAAKFEQTSRLHDTLTANGSNVAISTQCDFVFML
KSAFKKIDDDVGDRALDNQTEHEKEKRQTRVLKTIINRIKNDR
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgccaattagcaataaggtacaatcgaagttgaactcagtacagaataaaagaaaaact
tctaccccagtcgcaacacaaagtagccttctttcgtttcttaagaaagaagtaccagta
gaagctaacaatgaaagaaaagcttccgagaaactcgagctacctcttactcctgtaact
cctaaatctcggcgggagaaaaatatgcaaaatatcgataacgagcaagtaaataatgta
gaaactacgagtatcgccgagataaccgaagagtcaacttcgggggaaagggttttgaga
cgaagagttaaacgtaaaatttacgtttcttctgatgatgatgattcgaatgataagcac
gattccacagatcctccttcaaaaaaacctcatactaatattgatgatgactatgtcgat
aattgtgaacaaaaagaaagtgatgattttgatatgaatgatgaagctgctagtgaggat
gattcggaagataattcaatggcaaaatcttatcagaaaaaccgaaataaaaattcaaat
atcgtacagttcaaattaaagggattttcctcgagttcatcttctcgccgaggttcgagt
ttctcatcttcagctcatatgactaatactgagaaaaagaagcaacgtgctgtggatttt
aaagccaagaatgaagagcgatacagctggctgcaaaatgtttgtgatgtggatggaaat
cttgaaggatcacctaattacgatccacgtactttgtacgttcctaaatccgcgaagttt
actccgttcgaaaaacaatactgggaaatcaaatctaatcactgggatactgttgtattt
ttcaagaaaggaaaattttatgagttgtatgaacgtgatgcagatataggtcacacagaa
ttcgaccttaaacttacagatcgtgtcaatatgcgtatggtcggcgtacccgagtcttct
tttgaatattgggcagctaagtttatagcaaaaggtcacaaggtcgcaagagttgatcaa
atggaaacagcacttggcaaagagatgcgcgaaaaagcgagcaagaataaggaggaaaaa
gttataagacgccagttaacttctattcttactgccggaacaattgtagatggtggatta
ttaactgatgaaatgtcaacttattgcatgtcaattaaagaacattgtccaaacgaaatt
gatccaccttcttatggcgtttgttttgttgatactgcgaccggcgaattcaatcttgcg
tcatttgttgatgacattgataggacccaattcgaaactttaatcatgcaagtcaaacca
aaagaaatagtatatgaaaaaggaatgctcagtaaacgttcacagcgcattttaaaaaca
tgcattaattgcccaatatggaccgggctgatacctgaaagagaattttgggatgctaat
gcgacttgggatgagattaggttttctcgatatttttctaataaaccaaagaattcatct
gatcaagatgatgtcatcaatgaagataatgataatgaatataaaccggaaacttggcct
gaagctattaaaatatcccggaacaagcctttaatgttgtccgctttaggcggactgatt
tggtatttacgttcattgaaacttgacgaggaactagtatcattgcgaaacttcagaata
tatgacccgatttgtcatagcacttcactaatcctcgacggtcaaactttggcgaatctt
gaaattttcgagaataacttaaatggaagcgatcaaggaactgtatttaaattgttaaat
cattgcatcacaccatttggaaagcgaacttttaaacaatggttgtgtcatccgcttcga
aatgtagatgatattaatgaacgattggatgctattgaagaattaaataaacatcctggt
tttcgagaattatatgacgaaacatttttacattttccagatctggaaagattaatcagt
cggattcatgcaggaacatgcagagtaaaagactttttactcgtattaacttctttcgaa
aagctaatggatacagtagataaatttaaagaatatgcaaaacaattttattcgggtaaa
ttacttaaattaattgggagcgtaccggatctgtctcccatgttgttatattttaaagaa
gcttttgatcatgatcaagctgaaaaagaggggaaattattaccttatcctggaatcgaa
caggattatgatgaaattaatcaaaaactttgcacggttgagaagcaactagacgattat
ttgaaagagacaaaaaaattattgaagtctgataagattgtatacaaagatattggaaag
gaaatttatcagcttgaagttccaaatggtataaaggttccaaatgattggaagaagttg
tcgtgtactcggaaagtaaatcgttattggaactctactctccaaaaatttataagagat
cttcaagaatcacttgagactaaatccaatattttaaaatctctacaaggaagattttat
gaaaaatttgatgctcattatcaaaagacgttatccgcggttaaaatcatttcagagata
gactgtttgctcagcttggctgctagttcaaaggcattgggagaaccatcgtgtcgacct
caattcgcgcaagatggaccaagtgtcttggaattcgaagaactaagacacccctgcgtt
acgcccagcattgcgacagattttatacccaacgacacatatttgggaggtgacaatcaa
aatattatcttattgaccggtcctaatatgggtggaaaatccacattcttgcgtcagaat
tgtgtagcaattattatggcacagttaggttgttgcgtgcctgcaaaaaaatgtcgcttg
acaccctttgatagaatctatacacgcattggcgcaaatgataacatcctagcgggacag
agcactttcatggtagaattaaacgaaacttcaaagattttacatgaagcgacaccaaga
tctatggtcattcttgatgaattaggtcgcggtacttcaacctttgatgggtatgctatt
gcctattcggttttacattatttggcaacgcacatcggttgtttgggactattttctact
cattatggcatgttaacacaagaatttgacaagaatcctaatgtcgctcttaaacatatg
agctgtcaagttgatcaacacaaaaaagaggttacttttctttacaagttagtacctgga
gtatgtcccaaatcctatggaatgaatgtggctaatatggcaggagttccgcgagaaatt
gtagatcgtgcggaagttaccgctgctaaattcgaacaaacttcgcgcttgcacgatact
ttaactgctaatggctctaatgtagcaatttcaacgcagtgtgatttcgtatttatgttg
aagtctgcatttaaaaaaattgatgatgatgtaggtgatagagcattagataatcagact
gaacatgaaaaggagaagagacagactagagtgttgaaaactattataaataggattaag
aacgacagataa
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