KEGG   Rhizophagus irregularis: OCT59_005608
Entry
OCT59_005608      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K25178  coiled-coil domain-containing protein 174
Organism
rie  Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:rie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rie03019]
    OCT59_005608
   03041 Spliceosome [BR:rie03041]
    OCT59_005608
Messenger RNA biogenesis [BR:rie03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     OCT59_005608
Spliceosome [BR:rie03041]
 Complex C
  Other components
   EJC/TREX
    OCT59_005608
SSDB
Motif
Pfam: DUF4078
Other DBs
NCBI-GeneID: 36878910
NCBI-ProteinID: XP_025165822
LinkDB
Position
13:complement(4549650..4551476)
AA seq 345 aa
MQDPSKVFEISSTSVLDLKAELFKQREEFERQKVVAKNQPISAASRKVAKKPGIWERQNK
GVLERSHRDELEKVETSTLEASRAAMERKAKLYDHLSKTGISDEILSEEVLVDFDRKAWE
QPSEDEPTKEKDKSEDPWVEYVDEFGRTRVARKSEVPKSESPVIGPTIPNDDNEMIPEEL
LLQRWEEAAKKELNSGIGPIHYDETKEIRTKGVGFYRFSKDEEERQEQMRALKQLRLETE
LKRASRQTIKEKRQAQLDARMDMIRVKRRKISSKNGTNSTRSTEDTTTESVISDVTNIPN
ISSSSTDSTNNESFNKVLQLTNPEQAVNDLLSDIRRQIETKKKNG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcaagaccctagtaaagttttcgaaataagtagtacatcagttttagatttaaaagcc
gaactttttaaacaaagagaagagttcgaaagacaaaaagttgttgctaaaaatcaacct
atttccgctgcttcaagaaaagtagcaaagaaaccaggtatttgggaacgtcagaataaa
ggagtgcttgaaagatcacatcgagatgaattggaaaaggtagaaacatcaacattggag
gccagtagggctgccatggaaagaaaagccaaattatatgatcatctaagtaaaactggt
ataagtgatgaaatattatcagaagaagttttagtagattttgatcggaaagcttgggaa
caaccatcggaagatgaacctacaaaagaaaaagataaaagcgaagatccctgggtggag
tatgtagatgaatttggaagaacacgcgtggcacgaaaaagtgaagtacctaaatcagaa
tcaccggtcattggcccaacaataccaaacgatgataatgaaatgataccggaggagcta
ctactacaacgttgggaagaggctgctaagaaagagttgaattcgggtatcggtcctatc
cattatgatgaaacgaaagaaattcgaacaaagggtgttggtttctatcgattttctaaa
gatgaagaggaacgtcaagaacaaatgcgtgctttgaagcagttgcgtcttgagactgaa
ttgaaacgagcatcacgtcaaaccattaaagaaaaacgacaagcacagttggatgcaagg
atggatatgattcgagtaaaaagacgaaaaatatcttcaaaaaatggaacgaattctaca
cgatcaacagaagatactacaacagaatcagtcatttcagatgttacaaatatccctaat
atatcatcatcatctacagattcaacaaataacgaaagttttaacaaagttttacaatta
acaaacccagaacaagcagtaaatgatttattatcagatatcagaagacaaatagaaaca
aaaaagaaaaacggataa

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