Rhizophagus irregularis: OCT59_005608
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Entry
OCT59_005608 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K25178
coiled-coil domain-containing protein 174
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_005608
03041 Spliceosome [BR:
rie03041
]
OCT59_005608
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
OCT59_005608
Spliceosome [BR:
rie03041
]
Complex C
Other components
EJC/TREX
OCT59_005608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
36878910
NCBI-ProteinID:
XP_025165822
LinkDB
All DBs
Position
13:complement(4549650..4551476)
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AA seq
345 aa
AA seq
DB search
MQDPSKVFEISSTSVLDLKAELFKQREEFERQKVVAKNQPISAASRKVAKKPGIWERQNK
GVLERSHRDELEKVETSTLEASRAAMERKAKLYDHLSKTGISDEILSEEVLVDFDRKAWE
QPSEDEPTKEKDKSEDPWVEYVDEFGRTRVARKSEVPKSESPVIGPTIPNDDNEMIPEEL
LLQRWEEAAKKELNSGIGPIHYDETKEIRTKGVGFYRFSKDEEERQEQMRALKQLRLETE
LKRASRQTIKEKRQAQLDARMDMIRVKRRKISSKNGTNSTRSTEDTTTESVISDVTNIPN
ISSSSTDSTNNESFNKVLQLTNPEQAVNDLLSDIRRQIETKKKNG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaccctagtaaagttttcgaaataagtagtacatcagttttagatttaaaagcc
gaactttttaaacaaagagaagagttcgaaagacaaaaagttgttgctaaaaatcaacct
atttccgctgcttcaagaaaagtagcaaagaaaccaggtatttgggaacgtcagaataaa
ggagtgcttgaaagatcacatcgagatgaattggaaaaggtagaaacatcaacattggag
gccagtagggctgccatggaaagaaaagccaaattatatgatcatctaagtaaaactggt
ataagtgatgaaatattatcagaagaagttttagtagattttgatcggaaagcttgggaa
caaccatcggaagatgaacctacaaaagaaaaagataaaagcgaagatccctgggtggag
tatgtagatgaatttggaagaacacgcgtggcacgaaaaagtgaagtacctaaatcagaa
tcaccggtcattggcccaacaataccaaacgatgataatgaaatgataccggaggagcta
ctactacaacgttgggaagaggctgctaagaaagagttgaattcgggtatcggtcctatc
cattatgatgaaacgaaagaaattcgaacaaagggtgttggtttctatcgattttctaaa
gatgaagaggaacgtcaagaacaaatgcgtgctttgaagcagttgcgtcttgagactgaa
ttgaaacgagcatcacgtcaaaccattaaagaaaaacgacaagcacagttggatgcaagg
atggatatgattcgagtaaaaagacgaaaaatatcttcaaaaaatggaacgaattctaca
cgatcaacagaagatactacaacagaatcagtcatttcagatgttacaaatatccctaat
atatcatcatcatctacagattcaacaaataacgaaagttttaacaaagttttacaatta
acaaacccagaacaagcagtaaatgatttattatcagatatcagaagacaaatagaaaca
aaaaagaaaaacggataa
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