Rhizophagus irregularis: OCT59_005652
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Entry
OCT59_005652 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K25215
protein LMBR1L
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_005652
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
OCT59_005652
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LMBR1
Use1
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
36867846
NCBI-ProteinID:
XP_025178010
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Position
13:<4808241..4810298
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AA seq
556 aa
AA seq
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MTSIEENSILSASERAANEFYSWVRQNIIAFLLFVSLYSISYSLLQRFRRKNRITDIEEE
EDDPYGIDSLIIIILCAGGLAMALAGFLLWPFTMIATALLHNEIFSGNYYLTWLDVELLV
TLWNYAFIGCNISLFALLPFAFFYSETDQLRTFFAKARETLIIMGLVGMLMYGFIYTLKM
LFGISNVDELEMLNLFTCIGGALICLKATPRGYIEIFSCISKLPLRPNYRRSLKEKLKRN
KMDITVWQQRLENLERGLRSIYSVNNTSRSAILVPSTESQYSYSSEKLYASGIANNIITN
RSGHLSNSRNEIIAKINKLEEEEKRLQKDLSHSPLYRNMLFLVLFIVSHFIWLLILGHIL
YALMKSLLVDDGKELKNLEALIGKQTVSLFGFGTLNEITLIFCFTSATIIGVYSISPFKR
IRPRLGKMTVQQIIANVTVLLVISSSWPVLVRVLGLTRLSSAGPYENFSTMTNIGQYLAM
AFRVSALITTVFSTLEYYVLRMIRNPSHTPIVNGTSRQPYNHARFYQPPRDRNTDELNLN
RYFFHHSPPDHHGMRR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaatagaagaaaactctatacttagcgcaagtgagagagcagcaaacgaattt
tacagctgggttcgtcaaaacatcattgcgtttcttctatttgtctccctgtattcgata
tcttatagtttattacaacgatttcgaaggaaaaacagaattacagacatagaagaagaa
gaggatgatccgtatggcatagatagtttaataattatcatattgtgtgcgggaggattg
gcaatggcattagctggatttttgttatggccatttactatgatagcaacagctttgtta
cataacgaaatattttcaggaaattattatttgacttggttggatgttgaattattggtg
actttatggaattacgcttttataggctgtaatatttctttatttgccttattacctttt
gcttttttttatagtgaaaccgatcaacttcgaaccttttttgccaaggcaagggaaacc
ttaataattatgggtttggttggaatgttgatgtatggttttatttatactttgaaaatg
ctttttggaatatcaaatgtagatgaattagagatgttgaatttatttacatgtatagga
ggtgcattgatatgtttaaaagcaaccccaagaggttatattgaaatattttcatgtatt
agcaagcttcctttgcgaccaaattatcgaagatctttaaaggaaaagttgaaacgaaat
aagatggatattaccgtatggcaacaaagattggaaaatttagagcgtgggttgagatca
atatatagtgttaataatacatcacgttccgctatattagttccttcgacagaatcgcaa
tattcttattcatctgaaaagttgtatgcatctggaattgctaataatatcataaccaat
agatcagggcacctttcaaattcaagaaatgaaatcattgcaaagattaataagctcgaa
gaagaagagaagcgattacaaaaagatctctcgcattctccactttatcgaaatatgtta
tttttagttcttttcatagttagtcactttatttggttgctaatacttggacatatcttg
tacgctttgatgaagagtctattggtagatgatggaaaggaattaaaaaatttggaggcg
cttatcggcaaacaaacggtatcattatttggatttggtacattaaatgaaattacactg
attttttgttttacctcagcaacaattattggagtttattcaatatccccatttaaacga
attagacctcgtttaggaaaaatgacggttcaacaaattatagcaaatgttacggtttta
ttggtgataagcagttcgtggcctgttttagttagagtcttggggttaacaagattaagt
tcagctggaccttatgagaattttagtacaatgactaatataggacaatatctcgctatg
gcttttagagttagcgctttgattacaacagtattctcaacattagaatactatgtattg
agaatgatcagaaatccttctcatactcctatcgtaaatggaacttcacgtcaaccatat
aatcatgcaagattttatcaaccaccacgagacagaaatacagatgaattaaatttgaat
agatacttttttcatcattcaccgccagatcatcatggaatgagacgatag
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