Rhizophagus irregularis: OCT59_005696
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Entry
OCT59_005696 CDS
T10295
Name
(RefSeq) vacuolar protein sorting-associated protein 1
KO
K23481
vacuolar protein sorting-associated protein 1
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_005696
Membrane trafficking [BR:
rie04131
]
Endosome - Lysosome transport
Others
Others
OCT59_005696
Endosome - Golgi transport
OCT59_005696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
NPH3
YajC
Motif
Other DBs
NCBI-GeneID:
36867867
NCBI-ProteinID:
XP_025178059
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All DBs
Position
13:complement(4983614..>4987278)
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AA seq
694 aa
AA seq
DB search
MDTTLIKTVNKLQDAFATVGVQNPVDLPQIIVIGSQSSGKSSVLENIVGRDFLPRGTGIV
TRRPLVLQLINRPANETPNNDTPKTNGETPKPNGVTKDTKPKDSKEGDEWGEFLHIPGQK
FYDFDKIREEIVKDTELKTGKNAGISSQPINLRVYSPNVLTLTLVDLPGLTKVPVGDQPK
DIEKQIREMILKYITKPNSIILAVTPANTDLANSDGLKMAREVDPEGSRTIGVLTKVDLM
DQGTDVVDILAGRIIPLRLGYVPVVNRGQKDIETKKAITSALENERKYFEDHPAYKSKAQ
YCGTPFLARKLNMILMHHIRTTLPEIKAKIQATLLKYQNELLTLGDPINDGGHNHANLVL
NIITEFCSEFRTIIDGNSNELSSFELAGGARISFVFHEVYSNGVKSIDPFDQVKDVDIRT
ILYNSSGSSPALFVATTAFEVIIRNQIKRLEEPSLKCVTLVYDELVRILGQLLQKPVYKR
FPGLKEKFYSVVINFYKKSMVPTNKLVQDLVSMEASYINTAHPDFINGHTAMTVINEKLN
PKPINPADNKRNTLNTLINPLAEPEPANTGFFGSFFTGSKKKKPGVMDAPPPVLKATGNL
SEREIMETEVIKLLIQSYYNIVKKTLVDMVPKAVMLNLVYHAKEELQRELLQELYKADVL
DELLKESEFTQQRRKECKKMIEALQKADEIVSAV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacactactttaattaaaacagttaataaacttcaggacgcttttgctactgttggc
gttcagaacccggtagatttaccacagattatagttattggttcacaatcgagtggtaaa
agttccgttttagaaaatattgttggtcgtgactttttacctagggggacaggaattgtt
actcgaagacctttggtcttacaacttatcaatcgtccggcgaatgaaacgccaaataat
gatactcctaaaacaaatggtgaaactcctaaaccaaatggtgtaactaaagatactaag
cctaaagattcaaaagaaggtgatgaatggggtgaatttttacatattcccggtcaaaaa
ttttatgattttgataaaattcgagaagagattgtaaaggacactgaattgaaaactgga
aaaaatgccggtatttcttcacaacccatcaatttaagagtatactctcctaatgtgctc
acattgactcttgttgacttgcccggtcttacaaaggttcctgttggtgatcaaccaaaa
gatatcgaaaagcagattcgtgaaatgatattgaagtatatcactaaaccaaattctatc
attctcgcagttacaccagcaaatactgatttagcaaattcagatgggctcaaaatggct
cgtgaagttgatcctgaaggatcacggactattggtgttcttacaaaagttgatcttatg
gatcaaggaacagatgttgtagacatcttggccggacgtattattcctttacgacttggt
tatgtacctgttgtaaatcgtggtcaaaaggatattgaaactaaaaaagccattacatct
gctttggaaaatgaacgtaaatacttcgaagatcacccagcgtataagagcaaagcacag
tattgtggtacaccattccttgctcgtaaattgaatatgatacttatgcatcatattcgc
actacacttcctgaaattaaagctaaaattcaagcgacattattgaaataccaaaatgaa
ttgttaacgcttggtgatccaataaacgatggtggccataatcatgcaaacctcgttcta
aatataatcaccgaattttgttcagaattccgcactataattgatggcaattccaacgaa
ttatcttcattcgaattggcaggtggtgcgcgtataagctttgttttccatgaagtttat
tcaaatggtgtaaaatcaatagatccttttgatcaagtgaaagatgttgatattaggaca
attctctataattcctcgggatcctctccagctctattcgtcgctactactgcattcgaa
gtcataattaggaatcaaataaaacgtcttgaagaaccaagtttgaaatgtgtaacttta
gtttatgacgaattggtccgcattttaggtcaactgttgcagaaaccggtgtacaaacga
ttcccgggtttaaaagagaaattttactcagttgtaattaatttttataaaaagtccatg
gtaccaacaaataaacttgttcaggatcttgtatctatggaggcgagttatataaacacg
gcacatcctgactttataaacggtcatacagctatgacggttattaacgaaaagttaaat
cctaaaccaataaatcctgctgacaataagcgaaatactttgaacactcttataaatcca
ttagctgagcccgaacctgctaacacaggattctttggaagtttctttactggttcaaaa
aagaaaaagccaggtgttatggatgcgccaccgccagtccttaaagctaccggaaacctt
tccgaacgtgaaattatggaaacggaagtgattaaattacttattcaatcatattataat
atcgtgaagaaaactcttgtagatatggtgccaaaagcggtcatgcttaatcttgtttat
cacgcaaaggaagaacttcaacgtgaattattacaagagttatacaaagcagacgttttg
gacgagttacttaaggaaagtgaattcacacaacaaagacgtaaagaatgtaagaaaatg
attgaagctttacaaaaggctgatgagattgtatctgctgtctaa
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