Rhizophagus irregularis: OCT59_006159
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Entry
OCT59_006159 CDS
T10295
Name
(RefSeq) Small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
rie Rhizophagus irregularis
Pathway
rie03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OCT59_006159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_006159
03032 DNA replication proteins [BR:
rie03032
]
OCT59_006159
Spliceosome [BR:
rie03041
]
Complex A
U1 snRNP components
Sm proteins
OCT59_006159
U2 snRNP components
OCT59_006159
Complex B
U1 snRNP components
OCT59_006159
U4/U6.U5 tri-snRNP components
OCT59_006159
Complex C
U2 snRNP components
OCT59_006159
DNA replication proteins [BR:
rie03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
OCT59_006159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
36869125
NCBI-ProteinID:
XP_065997912
LinkDB
All DBs
Position
14:complement(2203335..2204316)
Genome browser
AA seq
114 aa
AA seq
DB search
MSTTAGKSKAEMTEEELRQLEEHEFNTGPLSVLQQSVKNNTQILINCRNNRKLLARVKAF
DRHCNMVLENVKEMWTETPKAGKGKKAKPVNKDRFISKMFLRGDSVILVLRNTV
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgagtactacagcaggaaaatcaaaggcagaaatgaccgaggaagagctccgtcaactt
gaggagcacgaattcaatactggtcctttatcggttttacaacaatcagtcaagaataat
actcaaatcttgataaactgtaggaataatcgaaagttactcgctcgtgttaaagcattt
gaccgacattgtaatatggtgttggaaaatgttaaagaaatgtggacggaaacgccaaag
gccggtaaaggtaagaaggccaagccggttaacaaggatagattcattagcaagatgttt
ttacgtggagattctgtcatacttgtgctgagaaatacggtataa
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